Transcription Factor

						

			
Accessions: T107713_1.02 (CISBP 1.02)

			
Names: IRF9, T107713_1.02;
Organisms: Ochotona princeps
Libraries: CISBP 1.02 1
1 Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. [Pubmed]
Notes: experiment type:PBM, family:IRF
Length: 390
Pfam Domains:    11-116 Interferon regulatory factor transcription factor
  216-379 Interferon-regulatory factor 3
Sequence: 
(in bold interface residues)		   1 MTLGKARSTRKLRTWVIEQVESGKFPGVCWDDAAKTMFRIPWKHAGKQDFREDQDAAFFK   60
  61 AWAIYKGKYREGDPSGPAAWKTRLRCALNKSSEFEEVPENGRMDVAEPYKVYRLLPPGTP  120
 121 SAKPEIQESPSKRHHSSVSFVQEEDAGPTRKCTFSPASCQGSLDDEETGNSTGSSHSNTG  180
 181 SSSNSPEPQEGVDVTAAEVQEDWGVLDFLRPPELDYSLLLTFIYGGRVVGEAQVHSLDCR  240
 241 LVAEPLGSDRNIEQVVFPKPDPLEPAQRLLSKLDRGLLVASNSRGLFAQQLCSLHISLHT  300
 301 PHALPGPTPHLLPNNKCVELFRTTYFCRDLARYLQGLGPPPKFQVTLNFWEESTGSTHSP  360
 361 QSLITVQMEQAFARHLLETPEEQAAILSLL
Interface Residues: 44, 46, 78, 82, 83, 85, 86, 87, 89, 90, 247, 250
3D-footprint Homologues: 2pi0_B, 8hcm_A, 1if1_B, 2irf_L, 7oot_B, 2o61_A, 8hcl_A, 6oem_A
Binding Motifs: M1270_1.02 aaygAAAsya
			
Related annotations: PaperBLAST

	
			


			

				

				
				
				
				

			

			

		

	
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