Transcription Factor

						

			
Accessions: F4K6R6 (JASPAR 2024)

			
Names: F4K6R6_ARATH
Organisms: Arabidopsis thaliana
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Uniprot: F4K6R6
Length: 275
Pfam Domains:     26-73 Myb-like DNA-binding domain
    29-89 Myb-like DNA-binding domain
   79-122 Myb-like DNA-binding domain
   82-131 Myb-like DNA-binding domain
Sequence: 
(in bold interface residues)		   1 MCDLLACLRKISMGRKPCCDKIGLKRGPWTIEEDHRLMNFILNNGIHCWRIVPKLAGLLR   60
  61 CGKSCRLRWINYLRPDLKRGGFTDAEEDRIMELHSQLGNRWSKIASHFSGRTDNEIKNHW  120
 121 NTKIKKKMKHLGLDPATHKPMNDITHQTDPNQDKKPNMCSTINEGEEIKDQTPKDDVITE  180
 181 TTKTLMLSDNDEELVAKNCKILCAEEVDLESLFETQCNEISSSSFSSLCSNISRSESSSY  240
 241 LAEDSISLEQWDLDMTDPFVPWDLFANLDDNLFLL
Interface Residues: 26, 61, 62, 63, 64, 66, 67, 71, 72, 113, 114, 117, 118, 121, 122, 123
3D-footprint Homologues: 3osg_A, 2kdz_A, 7xur_A, 3zqc_A, 1mse_C, 6kks_A, 7c4r_A
Binding Motifs: MA1770.1 yyyACCwAmywty
MA1770.2 yyyACCwAmy
			
Publications: Kelemen Z., Sebastian A., Xu W., Grain D., Salsac F., Avon A., Berger N., Tran J., Dubrecq B., Lurin C., Lepiniec L., Contreras-Moreira B., Dubos C. Analysis of the DNA-Binding Activities of the Arabidopsis R2R3-MYB Transcription Factor Family by One-Hybrid Experiments in Yeast. PLoS One 10, e0141044 (2015). [Pubmed]
Related annotations: PaperBLAST

	
			


			

				

				
				
				
				

			

			

		

	
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