Transcription Factor

						

			
Accessions: T076992_1.02 (CISBP 1.02)

			
Names: efl-2, T076992_1.02;
Organisms: Caenorhabditis elegans
Libraries: CISBP 1.02 1
1 Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. [Pubmed]
Notes: experiment type:PBM, family:E2F
Length: 358
Pfam Domains:     36-99 E2F/DP family winged-helix DNA-binding domain
    55-93 Sugar-specific transcriptional regulator TrmB
Sequence: 
(in bold interface residues)		   1 MDPSSIDLGSIPGGSEQQQHEDGAAAAAGSPKEVFRSQQSLGLITQRFMSLRQRNEVLNL   60
  61 NEVAKELNISKRRVYDVINVLEGLGYVEKVEKNNIRWIGDNNNSEEQNALEARVEMLRQQ  120
 121 EKLLELMIRDAQAIIELHFEDPIERPYNYVSKEDIRKTAEPNTKSIIVKSELDTSSSFEI  180
 181 QVTDPSTSGSHDMIVRNKNGVKSHALLFTNDPPEYGDEEDEDDVKKLSSQKRFETSEALR  240
 241 VTLAEMLTDPTTISSSPKHIKLEEPEEIDTEDLETFVLPPSTSASQSNAPYLPETPGRGL  300
 301 FFSPFKSLIDPCILPSFSDDLTSGYINITTPSRATGAGAGASGQEDEEPVSVMDFFSD
Interface Residues: 45, 52, 298
3D-footprint Homologues: 7o0h_A, 7o0g_A, 8urq_A
Binding Motifs: M0674_1.02 wksGCGsgyw
			
Related annotations: PaperBLAST

	
			


			

				

				
				
				
				

			

			

		

	
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