Transcription Factor

						

			
Accessions: T089323_1.02 (CISBP 1.02)

			
Names: FGSG_09047T0, T089323_1.02;
Organisms: Gibberella zeae
Libraries: CISBP 1.02 1
1 Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. [Pubmed]
Notes: experiment type:PBM, family:Homeodomain
Length: 777
Pfam Domains:    77-130 Homeobox domain
   89-128 Homeobox KN domain
Sequence: 
(in bold interface residues)		   1 MTYNNQNLFTDMDLLDGFISDDLTPYVSDSAPPFPDVTPTFNHAQINPASLTPGHTQLYQ   60
  61 SGSQPQPQPTPAKVGGRFTRESVRILKNWLATHQNHPYPREPDRKMLQEETGLTKTQISN  120
 121 WLANARRRGKIPSSASSPGHSTKAMDIPPRPGTPAVRNTSEMDPLQRWVDSPPEDEPAAV  180
 181 TAIARAVASVKPSSGSTSPYTRLSRTPSVRSVGTSRSSSISSVNSHTSQTSFGLNGLFSR  240
 241 GSSRRRRRAYKEERRSLATTHKAFQCTFCTETFRAKHDWQRHENSLHLPLERWVCSPEGP  300
 301 RGQKDDSSETLCVFCGHVDPDDAHIESHNYSACKNRPVQERTFNRKDHLNQHLKLVHNAK  360
 361 FAEWPMRQWKAPPPPIQSRCGFCNLVMENWSDRVHHLADHFKAGKTMADWKGDWGFEAHI  420
 421 LELVENSIPPSYFMQNHFYQHARMPTGDEMQLEACRILFASESSTGGLVCCSWLRDLVFS  480
 481 SAEISQQAQFGPMRTNAESRLSSMEISGKNNIFEGCPFETQLQEFVQAKQLLGLSIRDDE  540
 541 LREECCMIVGRLEEVSATPSDFIANFFVRVIHSPGDWLLPFRQRTGIELIDLSQCLNLNA  600
 601 MIQDYTRLEQELGSYLNMQRVIGLEPTDEELRHQARVIVHGTDSLLNHTAADDDYWLAAF  660
 661 RQRHSITTDASDTWTTPLRPNPHILAAQSLVLKTSTAFLNDHNYWRWFTQELRRWVAGIM  720
 721 SPHNPASRVPSDEEIQHYARWISYNDDDPFNQTIAENKDWLEAFKRDVGIDKSKPMG
Interface Residues: 76, 77, 120, 123, 124, 127, 128, 245, 247, 248, 251, 274, 275, 277, 278, 279, 281, 321, 323, 324, 326, 327, 345, 346, 347, 348, 351
3D-footprint Homologues: 1k61_B, 1le8_B, 1mnm_C, 5hod_A, 6fqq_E, 4xrm_B, 4xrs_G, 6fqp_B, 1puf_B, 5yel_A, 6ml4_A, 6e94_A, 2i13_A, 7eyi_G
Binding Motifs: M0827_1.02 CATGTCAw
			
Related annotations: PaperBLAST

	
			


			

				

				
				
				
				

			

			

		

	
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