Transcription Factor

						

			
Accessions: T083773_1.02 (CISBP 1.02)

			
Names: Q91765, T083773_1.02;
Organisms: Xenopus laevis, Xenopus sp.
Libraries: CISBP 1.02 1
1 Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. [Pubmed]
Notes: family:Forkhead
Length: 434
Pfam Domains:    17-148 Forkhead N-terminal region
  149-244 Fork head domain
  348-423 HNF3 C-terminal domain
Sequence: 
(in bold interface residues)		   1 MLGAVKMEGHEATDWSSYYGEAEAYSSVGNMNAGLSMNPMNTYMSMSAMRTSANMTASSM   60
  61 NMSYVNTGMSPSLTGMSPGTGAMTGMGTGVPSMASHLSPSMIPMSAQTTAMNALAPYTNI  120
 121 NSMSPIYGQSNINRSRDPKTYRRSYTHAKPPYSYISLITMAIQQSPNKMLTLSEIYQWIM  180
 181 DLFPFYRQNQQRWQNSIRHSLSFNDCFLKVPRSPDKPGKGSFWTLHPDSGNMFENGCYLR  240
 241 RQKRFKCEKKPSLREGGGKKLSEGASSVGSAANSSSESSVGNESPHSSSSPCQEQKRSLV  300
 301 DMKSSQGLSPKHATSPASQAQHLLSQHHSVLSHEAQSHLKPEHHYSFNHPFSINNLMSSE  360
 361 QQHHHHHHHNHHHHHKMDLKAYEQVMHYSSYGSPMAGSLAMSTVTNKSGLESSPITSDTS  420
 421 YYQGGYSRPIMNSS
Interface Residues: 98, 99, 139, 141, 143, 144, 146, 152, 192, 194, 195, 196, 198, 199, 200, 202, 203, 212, 219, 244
3D-footprint Homologues: 6fn0_A, 7yz7_A, 7yzb_A, 7vox_H, 2hdc_A, 2uzk_A, 7tdx_A, 2a07_J, 6nce_A, 3co6_C, 7vou_C, 6ako_C, 2c6y_A, 7yze_A, 7cby_C, 3g73_A, 6el8_A, 7yzg_A, 7tdw_A, 3l2c_A, 3qrf_G
Binding Motifs: M4105_1.02 wgwGTmAACAwwmw
			
Related annotations: PaperBLAST

	
			


			

				

				
				
				
				

			

			

		

	
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