Transcription Factor
| Accessions: | T001921_1.02 (CISBP 1.02) |
| Names: | PF07_0126, T001921_1.02; |
| Organisms: | Plasmodium falciparum |
| Libraries: | CISBP 1.02 1 1 Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. [Pubmed] |
| Notes: | experiment type:PBM, family:AP2 |
| Length: | 1331 |
| Pfam Domains: | 995-1045 AP2 domain 1078-1123 AP2 domain |
| Sequence: (in bold interface residues) | 1 MVLVVEYHNINTPVGKYSELENLKEEKEKRLYNNLEYVNLLDIRTLENKSIYVSSDLLNF 60 61 LKCYSNLNINLNKVPYDLVYSFLLDGELYLGYDISVFILLVKAEHFEYCRRIDNENSDKK 120 121 ESFRTKNKSTIKRSSQIDDEDNLQGLLIKEKEDYLSFLNENNEALKQYMESEKRGNPLWH 180 181 LDESKYMDKDWYDEEDSSFIFKPTFNYLGKNNNNNNNHNNNNAFSNFVMGNLSSDNISGC 240 241 FFVEKLNAYLFAMLDKCSNKTVISVFPYEKFGRHESRNLAIQFSQYEDYMHRIIEDRLYA 300 301 NIQNNLPSVHNMKNMSNMNNINNNNKDIIINRSGISNGNSQSVPCFENILDYDKLKFVEY 360 361 INSFSDVKKSSSFDIIGSSKNIYEQGENLKNYCIYHNNNFESGFENYILENKQPLELIEN 420 421 HFDIMENIKGMYDNTNQEEMNFNNVSGLLREDNSNMNEIYLTRDNHNNNYHENEENIYSI 480 481 NIKYINNHFNNKDDMIMKCKNMKGSISMDNNSSNSNSNNTHFEKTLESINPDDHNIFNSE 540 541 MDSMKNENNDEEEQTATSIYNILGKIGKDTYIKRCSSNYNYDNNNGYSNESSDNYNNGYN 600 601 DSTDNNNGYNSNSSYNSNNNEDDNNNNNNNDENCDNNNNHNNNNYNNNNNYGNNNNNNNN 660 661 NKDNNNNDGNGSSNNNNNDDDDEEEEDDEDDNNNNNDDDNMSDNEEMEDNDEDNDEYNNS 720 721 NDSYKYEEKDSNHEKDLKKDIIEGDMINSVKYDKNIGHHTTNKSEISTNYFENSCNMSVN 780 781 NSNNEAYDDNCNNGFMNHDEGLTLNNGNVSNNKCDIIIPEDGSVMYENMINRGNGLTSNI 840 841 NNNNNVSNNNSISCNADDNVYNNINNYINTYMETTNNKNHIENRCNQDSYSTNEEPLSNH 900 901 SINDPGKIKDGIMYDGNDLDMNGTQEHSKEEGMDVFEPNFFELKRNSSDGQNKHLEPGVQ 960 961 KKISKKRSKVKHERNSKILDDEKKEVLNKVSQITRVGGVCFDKNRQRWIAHWKIDGKYHK 1020 1021 HYFPISQYGFENARERAVSCRKQAEKLFNLPEIQPRNRWNQIKVNGTSHIKKAAKLPRCE 1080 1081 GIGYDELSQSWVSTFVVHKKFSIEELGFYEAREKAIYCRKTFEKVNVHDDYECLLNDRLG 1140 1141 LRNEEKDELSDLINIDKNALDNLELETSVHNNNKVKHNNNNNNNNNNNNNNNNNNNSEKM 1200 1201 RIKNNDFSVDNNNENVGTGEIKISNDKYLKITQEAIEMILSNIKHKSLPEIKMKLIDKQK 1260 1261 FENYNTLLDKHFKFITSVKNISQLRRYISLFHKFIIYHTLPHNISLRKQLFIIEALEWSS 1320 1321 FFSGAASEKVE |
| Interface Residues: | 33 |
| 3D-footprint Homologues: | 8cli_A |
| Binding Motifs: | M0047_1.02 AwTTTCCc |
| Related annotations: | PaperBLAST |
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.