Transcription Factor

						

			
Accessions: T13866 (AthalianaCistrome v4_May2016)

			
Names: AT3G28920, ATHB34, T13866;
Organisms: Arabidopsis thaliana
Libraries: AthalianaCistrome v4_May2016 1
1 O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]
Notes: ecotype:Col-0, experiment type: ampDAP-seq, experiment type: ampDAP-seq (methyl-cytosines removed by PCR), experiment type: DAP-seq, family:ZF-HD
Length: 312
Pfam Domains:    48-106 ZF-HD protein dimerisation region
Sequence: 
(in bold interface residues)		   1 MLEVRSMDMTPKSPEPESETPTRIQPAKPISFSNGIIKRHHHHHHNNNKVTYKECLKNHA   60
  61 AAIGGHALDGCGEFMPSPSSTPSDPTSLKCAACGCHRNFHRRETDDSSAVPPPSLLPSST  120
 121 TTAAIEYQPHHRHHPPPPLAPPLPRSPNSSSPPPISSSYMLLALSGNNKTAPFSDLNFAA  180
 181 AANHLSATPGSRKRFRTKFSSNQKEKMHEFADRIGWKIQKRDEDEVRDFCREIGVDKGVL  240
 241 KVWMHNNKNSFKFSGGGATTVQRNDNGIGGENSNDDGVRGLANDGDGGGGRFESDSGGAD  300
 301 GGGNVNASSSSS
Interface Residues: 194, 196, 242, 245, 246, 250
3D-footprint Homologues: 2lkx_A, 4xrs_G, 5hod_A, 2hdd_A, 6m3d_C, 1du0_A
Binding Motifs: M0860 wwwawthmyTAATyA
M0854 wwawaywTrATTAry
			
Related annotations: PaperBLAST

	
			


			

				

				
				
				
				

			

			

		

	
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