Transcription Factor

						

			
Accessions: NFIA_MOUSE (HOCOMOCO 10)

			
Names: CCAAT-box-binding transcription factor, CTF, NF-I/A, NF1-A, NFI-A, NFIA_MOUSE, Nuclear factor 1 A-type, Nuclear factor 1/A, Nuclear factor I/A, TGGCA-binding protein
Organisms: Mus musculus
Libraries: HOCOMOCO 10 1
1 Kulakovskiy IV, Vorontsov IE, Yevshin IS, Soboleva AV, Kasianov AS, Ashoor H, Ba-Alawi W, Bajic VB, Medvedeva YA, Kolpakov FA, Makeev VJ. HOCOMOCO: expansion and enhancement of the collection of transcription factor binding sites models. Nucleic Acids Res : (2016). [Pubmed]
Length: 532
Pfam Domains:     33-69 Nuclear factor I protein pre-N-terminus
   92-193 MH1 domain
  237-532 CTF/NF-I family transcription modulation region
Sequence: 
(in bold interface residues)		   1 MKLADSVMAGKASDGSIKWQLCYDISARTWWMDEFHPFIEALLPHVRAFAYTWFNLQARK   60
  61 RKYFKKHEKRMSKEEERAVKDELLSEKPEVKQKWASRLLAKLRKDIRPEYREDFVLTVTG  120
 121 KKPPCCVLSNPDQKGKMRRIDCLRQADKVWRLDLVMVILFKGIPLESTDGERLVKSPQCS  180
 181 NPGLCVQPHHIGVSVKELDLYLAYFVHAADSSQSESPSQPSEADIKDQPENGHLGFQDSF  240
 241 VTSGVFSVTELVRVSQTPIAAGTGPNFSLSDLESSSYYSMSPGAMRRSLPSTSSTSSTKR  300
 301 LKSVEDEMDSPGEEPFYTGQGRSPGSGSQSSGWHEVEPGLPSPSTLKKSEKSGFSSPSPS  360
 361 QTSSLGTAFTQHHRPVITGPRASPHATPSTLHFPTSPIIQQPGPYFSHPAIRYHPQETLK  420
 421 EFVQLVCPDAGQQAGQVGFLNPNGSSQGKVHNPFLPTPMLPPPPPPPMARPVPLPMPDTK  480
 481 PPTTSTEGGAASPTSPTYSTPSTSPANRFVSVGPRDPSFVNIPQQTQSWYLG
Interface Residues: 62, 65, 66, 70
3D-footprint Homologues: 2lkx_A
Binding Motifs: NFIA_MOUSE.H10MO.C|M01235 tTGGCacrgwGCCAr
			
Related annotations: PaperBLAST

	
			


			

				

				
				
				
				

			

			

		

	
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