Transcription Factor
| Accessions: | MYB50 (EEADannot 2025-07-22) |
| Names: | ZmMYB50;MYB50;GRMZM2G145444_T01 |
| Organisms: | Zea mays |
| Libraries: | EEADannot 2025-07-22 1 1 Contreras-Moreira B, Sebastian A. FootprintDB: Analysis of Plant Cis-Regulatory Elements, Transcription Factors, and Binding Interfaces. Methods Mol Biol 1482:259-77 (2016) [Pubmed] |
| Notes: | family:Tryptophan cluster factors MYB |
| Length: | 304 |
| Pfam Domains: | 11-56 Myb-like DNA-binding domain 14-72 Myb-like DNA-binding domain 63-106 Myb-like DNA-binding domain 66-116 Myb-like DNA-binding domain |
| Sequence: (in bold interface residues) | 1 MGVESECDRIKGPWSPEEDEALRRLVERHGARNWTAIGRGIPGRSGKSCRLRWCNQLSPQ 60 61 VERRPFTPEEDAAILAAHARLGNRWAAIARLLPGRTDNAVKNHWNSSLKRKLATATATSS 120 121 GSDAERACKRASPGPGSPTASDRSDLSHGCGAAQVFRPVPRAGGFDAISAADVRPPPPPA 180 181 VADEDPLTSLSLSLPGLDQSPSGFHHDSARSHFQELSPSSSPSPQSTPPAFPPQAAPSQS 240 241 SYAFSGELVAAMQEMIRAEVRKYMSGAGLRAGCGPGAVGEVCMPQLVEGVMRAAAERVGV 300 301 VTRP |
| Interface Residues: | 11, 45, 46, 47, 48, 50, 51, 54, 55, 56, 97, 98, 101, 102, 105, 106, 107 |
| 3D-footprint Homologues: | 3osg_A, 1vfc_A, 2kdz_A, 7xur_A, 5eyb_B, 6kks_A, 7c4r_A, 1mse_C, 3zqc_A |
| Binding Motifs: | EEAD0445 wamTAACtrmcwamy EEAD0446 awTAGTTAGkTAGTT |
| Related annotations: | PaperBLAST |
Disclaimer and license
These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.