Transcription Factor
| Accessions: | 6es2_K (3D-footprint 20231221) |
| Names: | Caudal-type homeobox protein 2, CDX-3, CDX2_HUMAN, Homeobox protein CDX-2 |
| Organisms: | Homo sapiens |
| Libraries: | 3D-footprint 20231221 1 1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed] |
| Length: | 70 |
| Pfam Domains: | 2-57 Homeobox domain |
| Sequence: (in bold interface residues) | 1 DKYRVVYTDHQRLELEKEFHYSRYITIRRKAELAATLGLSERQVKIWFQNRRAKERKINK 60 61 KKLQQQQQQQ |
| Interface Residues: | 2, 3, 4, 42, 43, 45, 46, 49, 50, 53, 54, 55, 56, 57 |
| 3D-footprint Homologues: | 1jgg_B, 3lnq_A, 1nk2_P, 1zq3_P, 2ld5_A, 7q3o_C, 6es3_K, 1b72_A, 4xrs_G, 3d1n_M, 2hos_A, 1ig7_A, 5zfz_A, 4cyc_A, 2d5v_B, 5flv_I, 1puf_A, 5zjt_E, 3a01_E, 2h1k_B, 7psx_B, 2lkx_A, 6a8r_A, 3cmy_A, 2hdd_A, 1fjl_B, 5jlw_D, 3rkq_B, 2r5y_A, 7xrc_C, 2xsd_C, 1e3o_C, 1au7_A, 1le8_A, 1o4x_A, 1le8_B, 1du0_A, 3l1p_A, 8g87_X, 4qtr_D, 1mnm_C, 5hod_A, 1puf_B, 1k61_B, 4xrm_B, 6m3d_C |
| Binding Motifs: | 6es2_K tTTatng |
| Binding Sites: | 6es2_A 6es2_D |
| Publications: | Morgunova E, Yin Y, Das PK, Jolma A, Zhu F, Popov A, Xu Y, Nilsson L, Taipale J. Two distinct DNA sequences recognized by transcription factors represent enthalpy and entropy optima. Elife : (2018). [Pubmed] |
| Related annotations: | PaperBLAST |
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