Transcription Factor
| Accessions: | T089486_1.02 (CISBP 1.02) |
| Names: | CNBG1320, T089486_1.02; |
| Organisms: | Cryptococcus neoformans |
| Libraries: | CISBP 1.02 1 1 Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. [Pubmed] |
| Notes: | experiment type:PBM, family:Homeodomain |
| Length: | 442 |
| Pfam Domains: | 316-368 Homeobox domain 339-368 Homeobox KN domain |
| Sequence: (in bold interface residues) | 1 MSARQQVPFRELSQEAKMSTSPPLRGIPIDRLSTRSFGREESMSKSSDNHKSVLLSPIAR 60 61 SSSSSPVPRPSHKLSEVVEAVEDKGKKTSQSLPAASLPLIFRSSPTLPPLNTRNPSRDSS 120 121 PSSRTGPPPHPTVFHVEHGAFPRKSKEHGHDCPPARPYFPPWYSHPLGYPHAHSSSERHY 180 181 SSLSRIHTHPEEYYSIHMPTDRYYNAPLHPYYDLEDYYPPPSPFPAHVYARGKEVYHRIP 240 241 QPSRPRLHIHPYAFPWSNEGDVRFYSGEGKGNVSQPSHGLGQGPVEGSSDRKLSKGTLSS 300 301 PASATSASAATVMSFKSPRKRTNDVQLAMLSDVFQRTQYPSTEERDELARQLGMTSRSVQ 360 361 IWFQNRRRAVKVDQQSAIQRAEAEARAAEATLRGLPAPPFLTGSVPGGSGSRRNSDSELE 420 421 DNTEVDAVMKRERKSPDAGMEG |
| Interface Residues: | 69, 316, 319, 321, 322, 357, 358, 360, 361, 364, 365, 368, 369, 372 |
| 3D-footprint Homologues: | 4c2u_D, 1ig7_A, 2h1k_B, 5zjt_E, 5hod_A, 2d5v_B, 1puf_A, 6m3d_C, 5jlw_D, 4cyc_A, 3a01_E, 4xrs_G, 3lnq_A, 2lkx_A, 5flv_I, 3rkq_B, 6a8r_A, 3l1p_A, 5zfz_A, 1au7_A, 2ld5_A, 2xsd_C, 7xrc_C, 1e3o_C, 1le8_A, 4j19_B, 7q3o_C, 4qtr_D, 3d1n_M, 1o4x_A, 6fqq_E, 1du0_A, 1jgg_B, 4xrm_B, 8g87_X, 6es3_K, 1puf_B, 7psx_B, 1fjl_B, 3cmy_A, 2hdd_A, 1nk2_P, 6fqp_B, 1b72_A, 2r5y_A, 1zq3_P, 2hos_A |
| Binding Motifs: | M0833_1.02 wTTAATwwa |
| Related annotations: | PaperBLAST |
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