Transcription Factor

						

			
Accessions: AtMYB105 (AthaMYB 1.0)

			
Names: 43081-41930, AtMYB105, LOF2, MYB-domain transcription factor LOF2, MYB-family transcription factor, putative, Myb-related transcription factor, putative, Putative transcription factor
Organisms: Arabidopsis thaliana
Libraries: AthaMYB 1.0 1
1 Kelemen Z., Sebastian A., Xu W., Grain D., Salsac F., Avon A., Berger N., Tran J., Dubrecq B., Lurin C., Lepiniec L., Contreras-Moreira B., Dubos C. Analysis of the DNA-Binding Activities of the Arabidopsis R2R3-MYB Transcription Factor Family by One-Hybrid Experiments in Yeast. PLoS One 10, e0141044 (2015). [Pubmed]
Uniprot: Q9SEZ4
Length: 331
Pfam Domains:   107-152 Myb-like DNA-binding domain
  110-170 Myb-like DNA-binding domain
  159-202 Myb-like DNA-binding domain
  162-203 Myb-like DNA-binding domain
Sequence: 
(in bold interface residues)		   1 MEMVHADVASLSITPCFPSSLSSSSHHHYNQQQHCIMSEDQHHSMDQTTSSDYFSLNIDN   60
  61 AQHLRSYYTSHREEDMNPNLSDYSNCNKKDTTVYRSCGHSSKASVSRGHWRPAEDTKLKE  120
 121 LVAVYGPQNWNLIAEKLQGRSGKSCRLRWFNQLDPRINRRAFTEEEEERLMQAHRLYGNK  180
 181 WAMIARLFPGRTDNSVKNHWHVIMARKFREQSSSYRRRKTMVSLKPLINPNPHIFNDFDP  240
 241 TRLALTHLASSDHKQLMLPVPCFPGYDHENESPLMVDMFETQMMVGDYIAWTQEATTFDF  300
 301 LNQTGKSEIFERINEEKKPPFFDFLGLGTV*
Interface Residues: 62, 64, 65, 95, 98, 99, 102, 103, 107, 141, 142, 143, 144, 146, 147, 151, 152, 193, 194, 197, 198, 201, 202, 203, 208
3D-footprint Homologues: 7nyw_B, 6x6z_A, 5eyb_B, 3osg_A, 7c4r_A, 1w0t_A, 2kdz_A, 7xur_A, 1mse_C, 3zqc_A, 6kks_A, 8ity_W
Binding Motifs: AtMYB105_II GTTAGTTA
AtMYB105_I WhhWGTTr
Binding Sites: GTTAGTTA
AAAAGTTA
ACAAGTTA
ATTAGTTG
TACTGTTG
			
Publications: Kelemen Z., Sebastian A., Xu W., Grain D., Salsac F., Avon A., Berger N., Tran J., Dubrecq B., Lurin C., Lepiniec L., Contreras-Moreira B., Dubos C. Analysis of the DNA-Binding Activities of the Arabidopsis R2R3-MYB Transcription Factor Family by One-Hybrid Experiments in Yeast. PLoS One 10, e0141044 (2015). [Pubmed]
Related annotations: PaperBLAST

	
			


			

				

				
				
				
				

			

			

		

	
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