Transcription Factor
| Accessions: | T016875_1.02 (CISBP 1.02) |
| Names: | l(1)sc, T016875_1.02; |
| Organisms: | Drosophila melanogaster |
| Libraries: | CISBP 1.02 1 1 Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. [Pubmed] |
| Notes: | experiment type:B1H, family:bHLH |
| Length: | 257 |
| Pfam Domains: | 87-146 Helix-loop-helix DNA-binding domain |
| Sequence: (in bold interface residues) | 1 MTSICSSKFQQQHYQLTNSNIFLLQHQHHHQTQQHQLIAPKIPLGTSQLQNMQQSQQSNV 60 61 GPMLSSQKKKFNYNNMPYGEQLPSVARRNARERNRVKQVNNGFVNLRQHLPQTVVNSLSN 120 121 GGRGSSKKLSKVDTLRIAVEYIRGLQDMLDDGTASSTRHIYNSADESSNDGSSYNDYNDS 180 181 LDSSQQFLTGATQSAQSHSYHSASPTPSYSGSEISGGGYIKQELQEQDLKFDSFDSFSDE 240 241 QPDDEELLDYISSWQEQ |
| Interface Residues: | 88, 89, 91, 92, 95, 96 |
| 3D-footprint Homologues: | 2ypa_A, 7z5k_B, 8osb_B, 2ql2_D |
| Binding Motifs: | M5064_1.02 GCAGGTG |
| Related annotations: | PaperBLAST |
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