Transcription Factor
| Accessions: | P09956 (JASPAR 2024) |
| Names: | ZEST_DROME |
| Organisms: | Drosophila melanogaster |
| Libraries: | JASPAR 2024 1 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Uniprot: | P09956 |
| Length: | 575 |
| Pfam Domains: | 54-125 Myb/SANT-like DNA-binding domain |
| Sequence: (in bold interface residues) | 1 MSAQGEGGGAGGSGGGGAGSDGGGNAGQSSTGSGTVAVTNGGNSSAKNQLPLTPRFTAEE 60 61 KEVLYTLFHLHEEVIDIKHRKKQRNKYSVRETWDKIVKDFNSHPHVSAMRNIKQIQKFWL 120 121 NSRLRKQYPYRDGSSSNLSSGSAKISSVSVSVASAVPQQQQQQHHQQHDSVKVEPEYQIS 180 181 PDASEHNPQADTFDEIEMDANDVSEIDEDPMEQQQQQQQEAQAQAQAQAQAQAQVQSAAA 240 241 EMQKMQQVNAVAAAAAANATMINTHQINVDQISAEKLTLNDLLHFKTARPREEIILIKHP 300 301 EATATQIHTIPTQAQQHPMATITAGGYNQQIISEIKPQQITLAQYQAQQQQQAQAQAQAQ 360 361 AQAQAQAQAQAQAQAQAQQLAQQQLAAAQHQQLAAAVQVHHQQQQQQQAAVAVQQQQAAA 420 421 AAAVKMQLTAATPTFTFSALPTVTAATTVPAAVPVPVATASSGSANSVAVNTSTASSVSI 480 481 NNTSLGGGGGNGATNSSATAADSFEERMNYFKIREAELRCKEQQLATEAKRIELNKAQDE 540 541 LKYMKEVHRLRVEELTMKIRILQKEEEQLRKCSTS |
| Interface Residues: | 55, 117, 120, 121, 124, 125 |
| 3D-footprint Homologues: | 5cqq_A |
| Binding Motifs: | MA0255.1 wTGAGtGrkw MA0255.2 wTGAGtG |
| Binding Sites: | MA0255.2.17 MA0255.1.1 MA0255.1.10 MA0255.1.11 MA0255.1.12 MA0255.1.13 MA0255.1.14 MA0255.1.15 MA0255.1.16 MA0255.1.17 MA0255.1.18 MA0255.1.19 MA0255.1.2 MA0255.1.20 MA0255.1.3 MA0255.1.4 MA0255.1.5 MA0255.1.6 MA0255.1.7 MA0255.1.8 MA0255.1.9 MA0255.2.6 MA0255.2.1 MA0255.2.10 MA0255.2.11 / MA0255.2.15 MA0255.2.12 MA0255.2.13 MA0255.2.14 MA0255.2.16 MA0255.2.18 MA0255.2.19 MA0255.2.2 MA0255.2.20 MA0255.2.3 MA0255.2.4 MA0255.2.5 MA0255.2.7 MA0255.2.8 MA0255.2.9 |
| Publications: | Bergman C.M, Carlson J.W, Celniker S.E. Drosophila DNase I footprint database: a systematic genome annotation of transcription factor binding sites in the fruitfly, Drosophila melanogaster. Bioinformatics (Oxford, England) 21:1747-9 (2005). [Pubmed] |
| Related annotations: | PaperBLAST |
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.