Transcription Factor

Accessions: 1z9c_C (3D-footprint 20231221), 1z9c_F (3D-footprint 20231221)
Names: OHRR_BACSU, Organic hydroperoxide resistance transcriptional regulator
Organisms: Bacillus subtilis, strain 168
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Uniprot: O34777
Length: 138
Pfam Domains: 31-89 MarR family
32-98 Winged helix DNA-binding domain
32-90 MarR family
Sequence:
(in bold interface residues)
1 HMKLENQLSFLLYASSREMTKQYKPLLDKLNITYPQYLALLLLWEHETLTVKKMGEQLYL 60
61 DSGTLTPMLKRMEQQGLITRKRSEEDERSVLISLTEDGALLKEKAVDIPGTILGLSKQSG 120
121 EDLKQLKSALYTLLETLH
Interface Residues: 52, 61, 62, 63, 64, 66, 67, 68, 70, 71, 72, 82, 88
3D-footprint Homologues: 7el3_B, 5yi2_J, 7dvv_A, 5h3r_A, 6c2s_C, 3q5f_A, 6jbx_A, 1z9c_A, 7b24_C, 5hlg_E, 4aik_A, 4fx4_B, 5hso_A, 3h25_A, 7prw_B
Binding Motifs: 1z9c_CD TTnAATynwnTTnTnTnnA
1z9c_EF TTnAAnCnAnTTnRnTnnAA
Binding Sites: 1z9c_K
1z9c_L
Publications: Hong M, Fuangthong M, Helmann J.D, Brennan R.G. Structure of an OhrR-ohrA operator complex reveals the DNA binding mechanism of the MarR family. Molecular cell 20:131-41 (2005). [Pubmed]
Related annotations: PaperBLAST

Disclaimer and license

These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.