Transcription Factor
| Accessions: | Q61321 (JASPAR 2024) |
| Names: | Homeobox protein SIX4, Sine oculis homeobox homolog 4, SIX4_MOUSE, Skeletal muscle-specific ARE-binding protein AREC3 |
| Organisms: | Mus musculus |
| Libraries: | JASPAR 2024 1 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Uniprot: | Q61321 |
| Length: | |
| Binding Motifs: | PH0164.1 atrmaTGACACCthybr MA2001.1 gwAACCTGAbm MA2001.2 AACCTGA |
| Binding Sites: | MA2001.1.1 / MA2001.1.2 MA2001.1.10 / MA2001.1.14 MA2001.1.11 / MA2001.1.15 MA2001.1.12 / MA2001.1.17 MA2001.1.13 / MA2001.1.18 MA2001.1.14 / MA2001.1.19 MA2001.1.15 / MA2001.1.20 MA2001.1.16 MA2001.1.17 MA2001.1.18 MA2001.1.19 MA2001.1.2 / MA2001.1.3 MA2001.1.20 MA2001.1.3 / MA2001.1.4 MA2001.1.4 / MA2001.1.7 MA2001.1.5 / MA2001.1.8 MA2001.1.6 / MA2001.1.9 MA2001.1.11 / MA2001.1.7 MA2001.1.12 / MA2001.1.8 MA2001.1.13 / MA2001.1.9 MA2001.2.7 MA2001.2.14 MA2001.1.1 MA2001.1.10 MA2001.1.16 MA2001.1.5 MA2001.1.6 MA2001.2.1 MA2001.2.10 / MA2001.2.11 / MA2001.2.15 MA2001.2.12 / MA2001.2.19 / MA2001.2.8 / MA2001.2.9 MA2001.2.13 / MA2001.2.16 / MA2001.2.20 / MA2001.2.3 / MA2001.2.4 / MA2001.2.6 MA2001.2.17 MA2001.2.18 / MA2001.2.2 MA2001.2.5 |
| Publications: | Berger M.F, Badis G, Gehrke A.R, Talukder S, Philippakis A.A, Peña-Castillo L, Alleyne T.M, Mnaimneh S, Botvinnik O.B, Chan E.T, Khalid F, Zhang W, Newburger D, Jaeger S.A, Morris Q.D, Bulyk M.L, Hughes T.R. Variation in homeodomain DNA binding revealed by high-resolution analysis of sequence preferences. Cell 133:1266-76 (2008). [Pubmed] Himeda CL, Ranish JA, Angello JC, Maire P, Aebersold R, Hauschka SD. Quantitative proteomic identification of six4 as the trex-binding factor in the muscle creatine kinase enhancer. Mol Cell Biol 24:2132-43 (2004). [Pubmed] |
| Related annotations: | PaperBLAST |
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