Transcription Factor

						

			
Accessions: GFI1_MOUSE (HOCOMOCO 10)

			
Names: GFI1_MOUSE, Growth factor independent protein 1, Zinc finger protein Gfi-1
Organisms: Mus musculus
Libraries: HOCOMOCO 10 1
1 Kulakovskiy IV, Vorontsov IE, Yevshin IS, Soboleva AV, Kasianov AS, Ashoor H, Ba-Alawi W, Bajic VB, Medvedeva YA, Kolpakov FA, Makeev VJ. HOCOMOCO: expansion and enhancement of the collection of transcription factor binding sites models. Nucleic Acids Res : (2016). [Pubmed]
Uniprot: P70338
Length: 423
Pfam Domains:   256-279 C2H2-type zinc finger
  256-279 Zinc finger, C2H2 type
  271-296 Zinc-finger double domain
  285-307 C2H2-type zinc finger
  285-307 Zinc finger, C2H2 type
  286-309 C2H2-type zinc finger
  299-324 Zinc-finger double domain
  313-332 Zinc-finger of C2H2 type
  313-335 C2H2-type zinc finger
  313-335 Zinc finger, C2H2 type
  315-331 C2H2-type zinc finger
  328-351 Zinc-finger double domain
  341-363 Zinc finger, C2H2 type
  341-350 C2H2-type zinc finger
  341-359 C2H2-type zinc finger
  356-379 Zinc-finger double domain
  368-391 C2H2-type zinc finger
  369-391 Zinc finger, C2H2 type
  369-391 C2H2-type zinc finger
  383-406 Zinc-finger double domain
  397-420 C2H2-type zinc finger
  398-420 Zinc finger, C2H2 type
  399-420 C2H2-type zinc finger
Sequence: 
(in bold interface residues)		   1 MPRSFLVKSKKAHSYHQPRSPGPDYSLRLETVPAPGRAEGGAVSAGESKMEPRERLSPDS   60
  61 QLTEAPDRASASPNSCEGSVCDPCSEFEDFWRPPSPSVSPASEKSLCRSLDEAQPYTLPF  120
 121 KPYAWSGLAGSDLRHLVQSYRQCSALERSAGLSLFCERGSEPGRPAARYGPEQAAGGAGA  180
 181 GQPGRCGVAGGATSAAGLGLYGDFAPAAAGLYERPSTAAGRLYQDHGHELHADKSVGVKV  240
 241 ESELLCTRLLLGGGSYKCIKCSKVFSTPHGLEVHVRRSHSGTRPFACEMCGKTFGHAVSL  300
 301 EQHKAVHSQERSFDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHT  360
 361 FIHTGEKPHKCQVCGKAFSQSSNLITHSRKHTGFKPFGCDLCGKGFQRKVDLRRHRETQH  420
 421 GLK
Interface Residues: 267, 269, 270, 273, 277, 295, 296, 297, 298, 299, 302, 303, 306, 313, 323, 324, 325, 326, 327, 328, 329, 330, 331, 332, 333, 334, 336, 351, 352, 353, 354, 355, 357, 358, 361, 379, 380, 381, 382, 383, 385, 386, 407, 408, 409, 410, 411, 412, 413, 414, 418
3D-footprint Homologues: 8ssq_A, 1tf6_A, 5v3j_F, 5kkq_D, 8ssu_A, 6wmi_A, 5und_A, 8gh6_A, 7y3m_I, 6jnm_A, 5k5i_A, 7w1m_H, 4m9v_C, 2i13_A, 6e94_A, 7ysf_A, 5yel_A, 2kmk_A, 7n5w_A, 6ml4_A, 5ei9_F, 8gn3_A, 2drp_D, 2gli_A, 8h9h_G, 7eyi_G, 2lt7_A, 6a57_A, 2jpa_A, 1ubd_C, 3uk3_C, 1tf3_A, 5k5l_F, 4x9j_A, 6blw_A, 2wbs_A, 6u9q_A, 1mey_C, 7txc_E, 5kl3_A, 1f2i_J, 1g2f_F, 7y3l_A, 8cuc_F, 1llm_D, 5yj3_D
Binding Motifs: GFI1_MOUSE.H10MO.C|M01127 rCwstGATTt
			
Related annotations: PaperBLAST

	
			


			

				

				
				
				
				

			

			

		

	
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