Transcription Factor

						

			
Accessions: T030048_1.02 (CISBP 1.02)

			
Names: GRMZM2G015534, T030048_1.02;
Organisms: Zea mays
Libraries: CISBP 1.02 1
1 Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. [Pubmed]
Notes: family:bZIP
Length: 435
Pfam Domains:   224-275 Basic region leucine zipper
  226-280 bZIP transcription factor
  293-410 Basic leucine-zipper C terminal
Sequence: 
(in bold interface residues)		   1 MEEILGPFWELLPPPAPEPEPEREQPPVTGIVVGSVIDVAAAGHGHGGGDMMDQQHATEW   60
  61 TFERLLEEEALTTSTPPPVVVVPNSCCSGALNVDRPPVMEEAVMMAPAAVSSAVVGDPME  120
 121 YNAILRRKLEEDLEAFKMWRAASSVVTSDQRSQGSNNHTGGSSIRNNPVQNKLMNGEDPI  180
 181 NNNHAQTAGLGVRLATSSSSRDPSPSDEDMDGEVEILGFKMPTEERVRKRKESNRESARR  240
 241 SRYRKAAHLKELEDQVAQLKAENSCLLRRIAALNQKYNDANVDNRVLRADMETLRAKVKM  300
 301 GEDSLKRVIEMSSSVPSSMPISAPTPSSDAPVPPPPIRDSIVGYFSATAADDDASVGNGF  360
 361 LRLQAHQEPASMVVGGTLSATEMNRVAAATHCAGAMELIQTAMGSMPPTSASGSTPPPQD  420
 421 YELLGPNGAIHMDMY
Interface Residues: 230, 231, 232, 233, 234, 235, 236, 237, 238, 239, 240, 241, 242
3D-footprint Homologues: 7x5e_E, 1gd2_G, 2wt7_B, 8k86_A, 8k8c_A, 6mg1_B, 5i50_B, 5t01_B, 2dgc_A
Binding Motifs: M2843_1.02 yATCTACGTGGAATGA
			
Related annotations: PaperBLAST

	
			


			

				

				
				
				
				

			

			

		

	
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