Transcription Factor
| Accessions: | T057807_1.02 (CISBP 1.02) |
| Names: | phol, T057807_1.02; |
| Organisms: | Drosophila melanogaster |
| Libraries: | CISBP 1.02 1 1 Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. [Pubmed] |
| Notes: | experiment type:B1H, family:C2H2 ZF |
| Length: | 669 |
| Pfam Domains: | 502-526 C2H2-type zinc finger 531-553 C2H2-type zinc finger 531-553 Zinc finger, C2H2 type 546-571 Zinc-finger double domain 559-583 C2H2-type zinc finger 559-583 Zinc finger, C2H2 type 575-601 Zinc-finger double domain 589-613 C2H2-type zinc finger 589-613 Zinc finger, C2H2 type |
| Sequence: (in bold interface residues) | 1 MTSHHHHVGVGGNFQPQLHQIRAPIVKNLSLAAAAVPLPLHSAPSSAYFTHAHQPTAATI 60 61 VEQDPYTVLAGDPMGEESESFLIEEIIDDYDDEANIVVDSGEFFEHYEYYPVDRLDRLTS 120 121 VTVATADALPPPIIMQQTSDDEEFIEEDGQQMTSSCDGDGDEDDEATAPATTNAFEIASE 180 181 MLTTIEATNIKEEQLESDFYMKATEDSNSSNGQLQDFKLFGSSRVERPMGNSAAKRWKQT 240 241 KVPIRITQDEFNVTLWSSLNSEDEDEEEELEEPPGCAGTTSVTSSSAAQNEGSPSMPKLI 300 301 IDEHMINHDVLSDGIGNEYVILPDPFSASAVTDVEEVVNAFMGDVKGEEDSQPLSEQLIY 360 361 AENQLEEAYGNIELIENMPNNVELIQTPGPGPATVSVALSKVNGCVPNPQPALPKLVLQN 420 421 SSTNVRLKSAGNQSKVTKRQLTAAAQVATPNPPPPLVASSNPARPQRPTIVTKLPTAVAN 480 481 QTAGNAMGAAGAAGEEDEEPKFRCTHRGCNKEFRNHSAMRKHMHTHGPRGHVCNVCGKSF 540 541 VESSKLKRHQLVHTGEKPFECTFEGCGKRFSLDFNLRTHVRIHTGDRPYHCPIDGCSKCF 600 601 AQSTNLKSHMLTHTKPKRKWPRAPQVSNNKTPLVARYGRLEFGEDPRLVYVEQNEEVASV 660 661 LLDGTSLTS |
| Interface Residues: | 515, 517, 518, 520, 521, 522, 523, 524, 541, 542, 543, 544, 545, 547, 548, 568, 569, 570, 571, 572, 573, 574, 575, 577, 578, 579, 582, 601, 602, 603, 604, 605, 606, 607, 608, 609, 636, 637, 638, 639, 642, 645 |
| 3D-footprint Homologues: | 5yel_A, 8gn3_A, 5ei9_F, 1tf6_A, 6ml4_A, 5v3j_F, 5k5l_F, 6e94_A, 7ysf_A, 2jpa_A, 1ubd_C, 8ssu_A, 5kkq_D, 8ssq_A, 7w1m_H, 7y3l_A, 1tf3_A, 7n5w_A, 6jnm_A, 8cuc_F, 6u9q_A, 4x9j_A, 2gli_A, 5kl3_A, 7txc_E, 5k5i_A, 2kmk_A, 6blw_A, 8h9h_G, 7y3m_I, 2lt7_A, 6a57_A, 3uk3_C, 2wbs_A, 5yj3_D, 1f2i_J, 1g2f_F, 1llm_D, 4m9v_C |
| Binding Motifs: | M5152_1.02 MAAdATGGCG |
| Related annotations: | PaperBLAST |
Disclaimer and license
These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.