Transcription Factor

						

			
Accessions: T12939 (AthalianaCistrome v4_May2016)

			
Names: AT3G10580, T12939;
Organisms: Arabidopsis thaliana
Libraries: AthalianaCistrome v4_May2016 1
1 O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]
Notes: ecotype:Col-0, experiment type: ampDAP-seq, experiment type: ampDAP-seq (methyl-cytosines removed by PCR), experiment type: DAP-seq, family:MYB-related
Length: 287
Pfam Domains:    96-140 Myb-like DNA-binding domain
Sequence: 
(in bold interface residues)		   1 MDAAIPIWKRDDDKRFELALVRFPAEGSPDFLENIAQFLQKPLKEVYSYYQALVDDVTLI   60
  61 ESGKYPLPKYPEDDYVSLPEATKSKTQGTGKKKGIPWSPEEHRLFLDGLNKYGKGDWKSI  120
 121 SRECVTSRSPMQVASHAQKYFLRQKNKKGKRFSIHDMTLGDAENVTVPVSNLNSMGQQPH  180
 181 FDDQSPPDHYQDYFSQSNVTIPGCNMHFMGQQPRFGDQIPPGEYHPYSRDNVTVTGSNLN  240
 241 SIGQQPHFNDQISPDQYGRYLQENFGFFDDDGEDDGSLASFQQLYKA
Interface Residues: 28, 29, 30, 31, 33, 34, 56, 58, 85, 87, 91, 94, 127, 128, 130, 134, 135, 138, 139
3D-footprint Homologues: 1r71_B, 7xur_A, 1vfc_A, 6qec_A, 7d3t_D
Binding Motifs: M0624 awwwwrGATAAGvwt
M0606 CCGAaAAwwTCGGar
			
Related annotations: PaperBLAST

	
			


			

				

				
				
				
				

			

			

		

	
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