Transcription Factor

Accessions: T130457_1.02 (CISBP 1.02)
Names: C11orf9, T130457_1.02;
Organisms: Homo sapiens
Libraries: CISBP 1.02 1
1 Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. [Pubmed]
Notes: experiment type:PBM, family:Ndt80/PhoG
Length: 176
Pfam Domains: 1-55 NDT80 / PhoG like DNA-binding family
103-163 Chaperone of endosialidase
Sequence:
(in bold interface residues)
1 TANNMRKKGKPNPDQRYFMLVVALQAHAQNQNYTLAAQISERIIVRASNPGQFESDSDVL 60
61 WQRAQVPDTVFHHGRVGINTDRPDEALVVHGNVKVMGSLMHPSDLRAKEHVQEVDTTEQL 120
121 KRISRMRLVHYRYKPEFAASAGIEATAPETGVIAQEVKEILPEAVKDTGDMVFANG
Interface Residues: 133, 134
3D-footprint Homologues: 2voa_B
Binding Motifs: M1418_1.02 TGGTACCA
Related annotations: PaperBLAST

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