Transcription Factor
| Accessions: | T105013_1.02 (CISBP 1.02) |
| Names: | Pou2f1, T105013_1.02; |
| Organisms: | Mus musculus |
| Libraries: | CISBP 1.02 1 1 Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. [Pubmed] |
| Notes: | experiment type:PBM, family:Homeodomain,POU |
| Length: | 769 |
| Pfam Domains: | 305-378 Pou domain - N-terminal to homeobox domain 406-462 Homeobox domain |
| Sequence: (in bold interface residues) | 1 MADGGAASQDESSAAAAAAADSRMNNPSETNKSSMESEDASTGTQTNGLDFQKQPVPVGG 60 61 AISTAQAQAFLGHLHQVQLAGTSLQAAAQSLNVQSKSSEESGDSQQSSQPSSQPPSVQSA 120 121 IPQTQLMLAGGQITGLTLTPAQQQLLLQQAQAQAQLLAAAVQQHSASQQHSAAGATISAS 180 181 AATPMTQIPLSQPIQIAQDLQQLQQLQQQNLNLQQFVLVHPTTNLQPAQFIISQTPQGQQ 240 241 GLLQAQNLLTQLPQQSQANLLQPQPSITLTSQPTTPTRTIAAASVQTLPQSQSTPKRIDT 300 301 PSLEEPSDLEELEQFAKTFKQRRIKLGFTQGDVGLAMGKLYGNDFSQTTISRFEALNLSF 360 361 KNMCKLKPLLEKWLNDAENLSSDSTASSPSALNSPGLGAEGLNRRRKKRTSIETNIRVAL 420 421 EKSFMENQKPTSEDITLIAEQLNMEKEVIRVWFCNRRQKEKRINPPSSGGTSSSPIKAIF 480 481 PSPASLVATTPSLVTSSTATTLTVNPVLPLTSAAVTNLSLTGTTDSTSNNNTATVISTAP 540 541 PASSAVTSPSLSPSPSASASTSEASSASETNTTQTTSTPLPSPLGASQVMVTTPGLQTAA 600 601 AALQGAAQLPANASLAAMAAAAGLSPGLMAPSQFAAGGALLSLSPGTLGSALSPALMSNS 660 661 TLATIQALASSGSLPITSLDATGNLVFANAGGAPNIVTAPLFLNPQNLSLLTSNPVSLVS 720 721 AAAASTGNSAPTASLHASSTSTESIQSSLFTVASASGPASTTTAASKAQ |
| Interface Residues: | 330, 346, 347, 348, 349, 351, 352, 358, 362, 405, 406, 407, 408, 409, 447, 448, 450, 451, 454, 455, 458, 459, 462 |
| 3D-footprint Homologues: | 3d1n_M, 3l1p_A, 7u0g_M, 7xrc_C, 1au7_A, 8g87_X, 2xsd_C, 1o4x_A, 1e3o_C, 4j19_B, 3a01_E, 5jlw_D, 1puf_A, 1fjl_B, 5zjt_E, 4cyc_A, 1ig7_A, 2h1k_B, 3cmy_A, 1zq3_P, 1nk2_P, 1jgg_B, 3lnq_A, 2lkx_A, 6m3d_C, 7q3o_C, 2ld5_A, 6es3_K, 3rkq_B, 2r5y_A, 7psx_B, 2hos_A, 1b72_A, 2hdd_A, 1le8_A, 1k61_B, 4xrs_G, 5flv_I, 1du0_A, 5hod_A, 4qtr_D |
| Binding Motifs: | M1237_1.02 tmATtwrcat |
| Related annotations: | PaperBLAST |
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.