Transcription Factor

						

			
Accessions: AL1G11460.t1 (EEADannot 2026-03-04)

			
Names: LHY
Organisms: Arabidopsis lyrata
Libraries: EEADannot 2026-03-04 1
1 Contreras-Moreira B, Sebastian A. FootprintDB: Analysis of Plant Cis-Regulatory Elements, Transcription Factors, and Binding Interfaces. Methods Mol Biol 1482:259-77 (2016) [Pubmed]
Notes: family:MYBRELATED
Length: 644
Pfam Domains:     24-68 Myb-like DNA-binding domain
Sequence: 
(in bold interface residues)		   1 MDTNISGEELLAKARKPYTITKQRERWTDDEHERFLEALRLYGRAWQRIEEHIVTKTAVQ   60
  61 IRSHAQKFFTKLEKEAEAKGIPVCQALDIEIPPPRPKRKPNTPYPRKHGNNGTSSSQVSS  120
 121 AKDAKLASSASSSQFNQSFLDLEKMPFSEKTSTGKENQDDNCSDVSTVNKYPLPKKVSIR  180
 181 KLGIADIETSKTSTVDNAVQDAPKKNKHKDGNDGTVYSVQNYLWHSHAGIVNGNIAKCPQ  240
 241 NHPLGMVSQDFMFHPMREESHGHANLQATTASATASHQAFPACHSQNDYHSFLQMSSTFS  300
 301 NLIMSNLLQNPAAHAAATFAASVWPYANVGNSGDSSTPVSSSPPSIAAIAAATVAAATAW  360
 361 WASHGLLPVCAPAPITCVPLPTPAMTEMGTVENAQLPLEKQNTALQDQNVASKSLASSSD  420
 421 DSEETGVTKLNVDSKTQGDKVGEVVAAAAVHDSNTTQKKNMVDRSSCGSNTPSGSDAETD  480
 481 ALDKMEKDKEDVKETDENQPDVIELNNRKIKMRDNNNNNNNPTTDSWKEVSEEGRIAFQA  540
 541 LFAREKLPQSFSLPQVAENVNGKQRDTAMPLVPNFKSQDSCAADQERVVMIGVGPGKNLK  600
 601 TRQTGFKPYKRCSMELKESQVGNTNNQSDEKVCKRLRLEGEAST
Interface Residues: 24, 62, 63, 66, 67
3D-footprint Homologues: 6j5b_C, 7d3t_D
Binding Motifs: EEAD0578 AGATATTT
			
Related annotations: PaperBLAST

	
			


			

				

				
				
				
				

			

			

		

	
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