Transcription Factor
| Accessions: | UP00442A (UniPROBE 20160601) |
| Names: | None, PFL1085w, putative, transcription factor with AP2 domain(s) |
| Organisms: | Plasmodium falciparum |
| Libraries: | UniPROBE 20160601 1 1 Hume MA, Barrera LA, Gisselbrecht SS, Bulyk ML. UniPROBE, update 2015: new tools and content for the online database of protein-binding microarray data on protein-DNA interactions. Nucleic Acids Res : (2015). [Pubmed] |
| Description: | transcription factor with AP2 domain(s), putative: putative Plasmodium falciparum transcription factor, AP2 domain |
| Length: | 123 |
| Pfam Domains: | 38-89 AP2 domain |
| Sequence: (in bold interface residues) | 1 LNVDENLKEVIDEIIRNSTILPQKGIRGRNTLDCNHPIHSVWKDTTRGHCSWRCRWWENG 60 61 RRLSKNFNVKRFGNDGALRMAITMKLKKSNPKEQMQLLKQQREYLKLCYGDNWEKKIKEL 120 121 QNV |
| Interface Residues: | 57, 59, 61, 64, 70, 72, 74, 75, 79 |
| 3D-footprint Homologues: | 1bbx_C, 2mru_A |
| Binding Motifs: | UP00442A_1 ydykakkGtGTACaCmwkrwcw |
| Binding Sites: | GAGTACTC GGCGTACA GGTGTACA TACGTACA ACGTACAC ACGTACAT CACGTACA CGCGTACA CGTGTACA GAGTACAA GAGTACAC GCGTACAC GGAGTACA GGGGTACA GGGTACAC GTACGTAC GTACTCCA GTAGTACA GTGTACAC TGTACACA |
| Publications: | Campbell TL, De Silva EK, Olszewski KL, Elemento O, Llinás M. Identification and genome-wide prediction of DNA binding specificities for the ApiAP2 family of regulators from the malaria parasite. PLoS Pathog : (2010). [Pubmed] |
| Related annotations: | PaperBLAST |
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