Transcription Factor
| Accessions: | CG5669 (FlyZincFinger 1.0 ) |
| Names: | CG5669 |
| Organisms: | Drosophila melanogaster |
| Libraries: | FlyZincFinger 1.0 1 1 Enuameh MS et al (2013) Global analysis of Drosophila Cys2-His2 zinc finger proteins reveals a multitude of novel recognition motifs and binding determinants. Genome Res. 23(6):928-40. doi: 10.1101/gr.151472.112 [Pubmed] |
| Notes: | family:Cys2His2 zinc finger |
| Length: | 130 |
| Pfam Domains: | 29-53 C2H2-type zinc finger 45-72 Zinc-finger double domain 59-83 Zinc finger, C2H2 type 59-83 C2H2-type zinc finger 76-98 Zinc-finger double domain 89-111 C2H2-type zinc finger 89-111 Zinc finger, C2H2 type |
| Sequence: (in bold interface residues) | 1 EPKPRLKRVACTCPNCTDGEKHSDKKRQHICHITGCHKVYGKTSHLRAHLRWHTGERPFV 60 61 CSWAFCGKRFTRSDELQRHRRTHTGEKRFQCQECNKKFMRSDHLSKHIKTHFKSRSGVEL 120 121 IELSIKQETK |
| Interface Residues: | 15, 17, 21, 41, 42, 43, 44, 45, 47, 48, 50, 51, 54, 70, 71, 72, 73, 74, 75, 77, 78, 79, 82, 99, 100, 101, 102, 103, 104, 105, 106, 107 |
| 3D-footprint Homologues: | 7w1m_H, 7ysf_A, 1tf3_A, 7n5w_A, 6jnm_A, 6ml4_A, 5kkq_D, 4x9j_A, 2gli_A, 5kl3_A, 1tf6_A, 5ei9_F, 1g2f_F, 1ubd_C, 8ssq_A, 6blw_A, 2kmk_A, 1llm_D, 6u9q_A, 5yel_A, 8ssu_A, 8h9h_G, 5v3j_F, 6e94_A, 2lt7_A, 7y3m_I, 6a57_A, 2jpa_A, 8gn3_A, 5k5i_A, 7y3l_A, 3uk3_C, 8cuc_F, 1f2i_J, 2wbs_A, 7txc_E, 2drp_D, 4m9v_C, 5yj3_D |
| Binding Motifs: | CG5669_SANGER_10_FBgn0039169 drkGGGCGkGGYcwm CG5669_SOLEXA_5_FBgn0039169 rgkGGGCGkGGCywm |
| Related annotations: | PaperBLAST |
Disclaimer and license
These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.