Transcription Factor
| Accessions: | SUH_MOUSE (HOCOMOCO 10) |
| Names: | J kappa-recombination signal-binding protein, RBP-J kappa, Recombining binding protein suppressor of hairless, SUH_MOUSE |
| Organisms: | Mus musculus |
| Libraries: | HOCOMOCO 10 1 1 Kulakovskiy IV, Vorontsov IE, Yevshin IS, Soboleva AV, Kasianov AS, Ashoor H, Ba-Alawi W, Bajic VB, Medvedeva YA, Kolpakov FA, Makeev VJ. HOCOMOCO: expansion and enhancement of the collection of transcription factor binding sites models. Nucleic Acids Res : (2016). [Pubmed] |
| Length: | 526 |
| Pfam Domains: | 73-204 LAG1, DNA binding 205-354 Beta-trefoil DNA-binding domain 382-470 IPT/TIG domain |
| Sequence: (in bold interface residues) | 1 MPSGFPQSPRTSPRARPKTRITGALPMDYSEGLSAEERPAHAPSAGKFGERPPPKRLTRE 60 61 AMRNYLKERGDQTVLILHAKVAQKSYGNEKRFFCPPPCVYLMGSGWKKKKEQMERDGCSE 120 121 QESQPCAFIGIGNSDQEMQQLNLEGKNYCTAKTLYISDSDKRKHFMLSVKMFYGNSDDIG 180 181 VFLSKRIKVISKPSKKKQSLKNADLCIASGTKVALFNRLRSQTVSTRYLHVEGGNFHASS 240 241 QQWGAFYIHLLDDDESEGEEFTVRDGYIHYGQTVKLVCSVTGMALPRLIIRKVDKQTALL 300 301 DADDPVSQLHKCAFYLKDTERMYLCLSQERIIQFQATPCPKEQNKEMINDGASWTIISTD 360 361 KAEYTFYEGMGPVLAPVTPVPVVESLQLNGGGDVAMLELTGQNFTPNLRVWFGDVEAETM 420 421 YRCGESMLCVVPDISAFREGWRWVRQPVQVPVTLVRNDGVIYSTSLTFTYTPEPGPRPHC 480 481 SAAGAILRANSSQVPSNESNTNSEGNYTNASTNSTSVTSSTATVVS |
| Interface Residues: | 86, 89, 91, 191, 192, 195, 220, 221, 222 |
| 3D-footprint Homologues: | 3brd_A, 3iag_C, 5e24_E |
| Binding Motifs: | SUH_MOUSE.H10MO.C|M01371 cgTGGGAAm |
| Related annotations: | PaperBLAST |
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