Transcription Factor
| Accessions: | T057716_1.02 (CISBP 1.02) |
| Names: | Sp1, T057716_1.02; |
| Organisms: | Drosophila melanogaster |
| Libraries: | CISBP 1.02 1 1 Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. [Pubmed] |
| Notes: | experiment type:B1H, family:C2H2 ZF |
| Length: | 715 |
| Pfam Domains: | 385-409 Zinc finger, C2H2 type 401-428 Zinc-finger double domain 415-439 C2H2-type zinc finger 415-439 Zinc finger, C2H2 type 432-454 Zinc-finger double domain 445-468 C2H2-type zinc finger 445-467 Zinc finger, C2H2 type |
| Sequence: (in bold interface residues) | 1 MLTDMTPTAGQLYGSQIPAMGMNISNIATHLQKPQVNPDHPSLRGTPLAMLAAQCNKLSN 60 61 KSPPPLADAAVGKGFHPWKKSPNSPAAGSSGSSGGGGGGGGSSAGQHSPCAISAASSSSS 120 121 SGSSGGQSSRSLSSSASTMVNITASRPLASSCAAVGGGSTGSSSSASGSQSSSTASAVAA 180 181 AYGGDLYFPNTSTSNMDNHHMHQGLLGKVEAGAAAFGGVYSRHPYDWPFNAVTHKEAASV 240 241 NSGWWDMHSAAGSWLDMGGAGMHSTMANYASENYSSALSHSLLGSGQHLLQDTYKSMLPG 300 301 QGVGVGVGVGMGGFSLPHSSPSAAAAAAATAAAAAGGSPQGGSPSTPSPRSQRRYAGRAT 360 361 CDCPNCQEAERLGPAGVHLRKKNIHSCHIPGCGKVYGKTSHLKAHLRWHTGERPFVCNWL 420 421 FCGKRFTRSDELQRHLRTHTGEKRFACPVCNKRFMRSDHLAKHVKTHNGTANHQANGHNG 480 481 GLKKGSSESCSDSEEAANQSGESNGLGGVGSGPQTGGAGGGGGGSSSGNGAGTLAVSGSV 540 541 TTGAGAGSGTGSSNSNSNSGGSSGSVSGSVSGSGSHPGTPTSLHAHSANGTSSSLLGGGL 600 601 HLATPHQMVAAGGSPVMLHQQQQQQQHQQQQQQQQQQQHQQQQQQQHQQQQQQHQQQQQQ 660 661 HHQQQQQHHHQQFGQQQHPHAHHLHHHAHHAHHLATGGSPGLDPSSLVDIKPPMV |
| Interface Residues: | 350, 367, 368, 369, 370, 371, 372, 373, 374, 377, 381, 397, 398, 399, 400, 401, 403, 404, 406, 407, 410, 427, 428, 429, 430, 431, 433, 434, 435, 438, 455, 456, 457, 458, 459, 460, 461, 462, 463, 465 |
| 3D-footprint Homologues: | 2i13_A, 8ssu_A, 6ml4_A, 5kkq_D, 8ssq_A, 7w1m_H, 5yel_A, 6jnm_A, 8cuc_F, 1tf3_A, 7n5w_A, 1tf6_A, 6u9q_A, 4x9j_A, 5kl3_A, 1ubd_C, 7ysf_A, 5ei9_F, 1mey_C, 5und_A, 5k5i_A, 2kmk_A, 2gli_A, 1g2f_F, 6blw_A, 8h9h_G, 7eyi_G, 7y3m_I, 6e94_A, 6wmi_A, 2lt7_A, 6a57_A, 2jpa_A, 3uk3_C, 7y3l_A, 1llm_D, 7txc_E, 2wbs_A, 2drp_D, 1f2i_J, 4m9v_C, 8gn3_A, 5yj3_D, 5v3j_F |
| Binding Motifs: | M5209_1.02 gkGGGCGkrkc |
| Related annotations: | PaperBLAST |
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.