Transcription Factor
| Accessions: | T017937_1.02 (CISBP 1.02) |
| Names: | NCU01871, T017937_1.02; |
| Organisms: | Neurospora crassa |
| Libraries: | CISBP 1.02 1 1 Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. [Pubmed] |
| Notes: | experiment type:PBM, family:bHLH |
| Length: | 374 |
| Pfam Domains: | 252-330 Helix-loop-helix DNA-binding domain |
| Sequence: (in bold interface residues) | 1 MDIRTITMDQPIAFTSYTTVPYSTGQLQTCPESLTDFSPVALYEDFNSTDFNSDSAGSPV 60 61 SPLSPVPSATSFGLFSPYGDDLFRWGKFEREHFEPSPESEDCFKSEPYDGSLISTLPPRP 120 121 LTASPSINPVELSLEVPTTTQDLNFNFEGTNTNSPLFQSQVMDVTPPSQRSTPAAVIEPQ 180 181 PQQQQPIELAEDVKRYPSRNNLKRKSSCSSSSDEEECRPAKRVSLSPPPNSSHSPPIKQE 240 241 KSTSLPSMTAPKKTAHNMIEKRYRTNLNDKIAALRDSVPSLRIAAMRMESGNYDDEYEGE 300 301 EGDLSGLIPAPKLNKATILSKATEYISQLERRNHGLETENSALRGRMENLEMFLISRGGG 360 361 PSGPFVWNQQEWPR |
| Interface Residues: | 253, 255, 256, 257, 259, 260, 263, 264, 292, 315 |
| 3D-footprint Homologues: | 8osb_B, 1an4_A, 7rcu_E, 4h10_A, 6g1l_A, 7ssa_L, 5eyo_A, 7d8t_A, 1am9_A, 8hov_A, 5gnj_I, 7f2f_B, 8ia3_B, 5i50_B, 8osl_P |
| Binding Motifs: | M0232_1.02 rtcryrygay |
| Related annotations: | PaperBLAST |
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.