Transcription Factor
| Accessions: | T057709_1.02 (CISBP 1.02) |
| Names: | klu, T057709_1.02; |
| Organisms: | Drosophila melanogaster |
| Libraries: | CISBP 1.02 1 1 Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. [Pubmed] |
| Notes: | experiment type:B1H, family:C2H2 ZF |
| Length: | 803 |
| Pfam Domains: | 590-613 Zinc finger, C2H2 type 590-612 C2H2-type zinc finger 590-613 C2H2-type zinc finger 626-648 C2H2-type zinc finger 626-648 Zinc finger, C2H2 type 626-648 C2H2-type zinc finger 641-664 Zinc-finger double domain 653-676 C2H2-type zinc finger 654-676 C2H2-type zinc finger 654-676 Zinc finger, C2H2 type 668-690 Zinc-finger double domain 682-704 C2H2-type zinc finger 682-704 Zinc finger, C2H2 type |
| Sequence: (in bold interface residues) | 1 MTMAEGTDPMGHGHHTNPHNPPQQPPQHHPHHLPLPHPPPAPPPQLLNFNHHQQQYLPHM 60 61 YPAAAAAAQSHSHYGGLQYPHPHALQHQHHPHQHQHHLPLALSLHQQAAAAAAVAAAVAT 120 121 NHSNNNNQASVANNNIVVPWKQRKRKRLSAVLDKLHHNNNNNNNNNNETHSNGMACKAEP 180 181 MEMKGDLAEDAEQDEDHDGSVPDEEDDSVDQDGDAGKYIKSEQPVSEDEENEQEMDQDIE 240 241 DISGEDLELSHSDDNDQDDSPRISMSPLQLQAAQSNLPQDQNQPMNKENPLHVDIKTEIP 300 301 SPYDRYFPIPSPLFGYYLHTKYLNEVFRRRHDLYPSPLQHTPSSIASETETSPNAQERKS 360 361 SSNHVLPHALLANNSPPPSLPSPPRSESSVTNNVATTTTSSTTKKRSSPKPKGKKGEKKP 420 421 MPPPQERPLDLCMRNEVEPKKYKKSGSKSSLESRSAGMMPPPPALSAASSLESMSALSPA 480 481 SSSHSGHMPITSAATPNHQPPPNSPYANAMNAAHAAAAAAAAAMIKMEMPLHPLHHQQMH 540 541 HSQVPTTTVGVPVIKGDVASPTTKETVAWRYNLDVSPVVEEMPPGSDVAYVCPTCGQMFS 600 601 LHDRLAKHMASRHKSRNPANDIAKAYSCDVCRRSFARSDMLTRHMRLHTGVKPYTCKVCG 660 661 QVFSRSDHLSTHQRTHTGEKPYKCPQCPYAACRRDMITRHMRTHTRYDSRGGSREGREGR 720 721 EGREGKESRDSRRSNERIEEPNSPGSHSLLDMKMNMNMGMGMGLNMGLPMNPMSLLQEEL 780 781 LQKSQPGLTLGGPMPLVVKTESA |
| Interface Residues: | 600, 601, 602, 603, 604, 606, 607, 611, 626, 636, 637, 638, 639, 640, 642, 643, 664, 665, 666, 667, 668, 670, 671, 672, 675, 689, 691, 693, 694, 695, 696, 697, 698, 699, 700 |
| 3D-footprint Homologues: | 6jnm_A, 1tf6_A, 5ei9_F, 6ml4_A, 5v3j_F, 8ssq_A, 7w1m_H, 2drp_D, 8ssu_A, 5kkq_D, 7ysf_A, 6e94_A, 6a57_A, 5yel_A, 1ubd_C, 2kmk_A, 1tf3_A, 7n5w_A, 8cuc_F, 8gn3_A, 4x9j_A, 2gli_A, 1f2i_J, 5kl3_A, 2jpa_A, 1g2f_F, 6blw_A, 1llm_D, 8h9h_G, 7y3m_I, 5k5i_A, 2lt7_A, 3uk3_C, 7y3l_A, 2wbs_A, 7txc_E, 6u9q_A, 4m9v_C, 5yj3_D |
| Binding Motifs: | M5054_1.02 tGyGkGGGTGk |
| Related annotations: | PaperBLAST |
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.