Transcription Factor
| Accessions: | T153741_1.02 (CISBP 1.02), P25583 (JASPAR 2024) |
| Names: | KAR4, T153741_1.02;, KAR4_YEAST |
| Organisms: | Saccharomyces cerevisiae |
| Libraries: | CISBP 1.02 1, JASPAR 2024 2 1 Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. [Pubmed] 2 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Length: | 335 |
| Pfam Domains: | 137-290 MT-A70 |
| Sequence: (in bold interface residues) | 1 MAFQDPTYDQNKSRHINNSHLQGPNQETIEMKSKHVSFKPSRDFHTNDYSNNYIHGKSLP 60 61 QQHVTNIENRVDGYPKLQKLFQAKAKQINQFATTPFGCKIGIDSIVPTLNHWIQNENLTF 120 121 DVVMIGCLTENQFIYPILTQLPLDRLISKPGFLFIWANSQKINELTKLLNNEIWAKKFRR 180 181 SEELVFVPIDKKSPFYPGLDQDDETLMEKMQWHCWMCITGTVRRSTDGHLIHCNVDTDLS 240 241 IETKDTTNGAVPSHLYRIAENFSTATRRLHIIPARTGYETPVKVRPGWVIVSPDVMLDNF 300 301 SPKRYKEEIANLGSNIPLKNEIELLRPRSPVQKAQ |
| Interface Residues: | 178, 180, 242, 264, 267, 268 |
| 3D-footprint Homologues: | 4dpv_Z |
| Binding Motifs: | M4212_1.02 ArvCdGwtTTTGwkkT UN0435.1 dwtTGTTTCAdww UN0435.2 tTGTTTCA |
| Binding Sites: | UN0435.2.15 UN0435.2.18 / UN0435.2.19 / UN0435.2.7 UN0435.2.10 / UN0435.2.13 / UN0435.2.17 / UN0435.2.8 UN0435.2.1 / UN0435.2.6 UN0435.1.1 UN0435.1.10 / UN0435.1.11 UN0435.1.11 UN0435.1.12 UN0435.1.13 UN0435.1.14 UN0435.1.14 / UN0435.1.15 UN0435.1.16 UN0435.1.17 UN0435.1.18 UN0435.1.19 UN0435.1.2 UN0435.1.20 UN0435.1.3 UN0435.1.4 UN0435.1.5 UN0435.1.6 UN0435.1.7 / UN0435.1.8 UN0435.1.8 / UN0435.1.9 UN0435.1.10 / UN0435.1.9 UN0435.1.15 UN0435.1.3 UN0435.1.7 UN0435.2.11 UN0435.2.12 UN0435.2.14 UN0435.2.16 UN0435.2.2 / UN0435.2.20 / UN0435.2.4 / UN0435.2.5 UN0435.2.3 UN0435.2.9 |
| Related annotations: | PaperBLAST |
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