Transcription Factor
| Accessions: | IKZF1_MOUSE (HOCOMOCO 10) |
| Names: | DNA-binding protein Ikaros, Ikaros family zinc finger protein 1, IKZF1_MOUSE, Lymphoid transcription factor LyF-1 |
| Organisms: | Mus musculus |
| Libraries: | HOCOMOCO 10 1 1 Kulakovskiy IV, Vorontsov IE, Yevshin IS, Soboleva AV, Kasianov AS, Ashoor H, Ba-Alawi W, Bajic VB, Medvedeva YA, Kolpakov FA, Makeev VJ. HOCOMOCO: expansion and enhancement of the collection of transcription factor binding sites models. Nucleic Acids Res : (2016). [Pubmed] |
| Length: | 517 |
| Pfam Domains: | 132-154 Zinc-finger double domain 144-166 C2H2-type zinc finger 144-166 Zinc finger, C2H2 type 158-181 Zinc-finger double domain 172-194 C2H2-type zinc finger 172-194 Zinc finger, C2H2 type 187-210 Zinc-finger double domain 200-223 C2H2-type zinc finger 200-223 Zinc finger, C2H2 type |
| Sequence: (in bold interface residues) | 1 MDVDEGQDMSQVSGKESPPVSDTPDEGDEPMPVPEDLSTTSGAQQNSKSDRGMGSNVKVE 60 61 TQSDEENGRACEMNGEECAEDLRMLDASGEKMNGSHRDQGSSALSGVGGIRLPNGKLKCD 120 121 ICGIVCIGPNVLMVHKRSHTERPFQCNQCGASFTQKGNLLRHIKLHSGEKPFKCHLCNYA 180 181 CRRRDALTGHLRTHSVGKPHKCGYCGRSYKQRSSLEEHKERCHNYLESMGLPGVCPVIKE 240 241 ETNHNEMAEDLCKIGAERSLVLDRLASNVAKRKSSMPQKFLGDKCLSDMPYDSANYEKED 300 301 MMTSHVMDQAINNAINYLGAESLRPLVQTPPGSSEVVPVISSMYQLHKPPSDGPPRSNHS 360 361 AQDAVDNLLLLSKAKSVSSEREASPSNSCQDSTDTESNAEEQRSGLIYLTNHINPHARNG 420 421 LALKEEQRAYEVLRAASENSQDAFRVVSTSGEQLKVYKCEHCRVLFLDHVMYTIHMGCHG 480 481 CHGFRDPFECNMCGYHSQDRYEFSSHITRGEHRYHLS |
| Interface Residues: | 127, 128, 129, 130, 131, 133, 134, 136, 137, 140, 141, 144, 154, 155, 156, 157, 158, 160, 161, 162, 165, 182, 183, 184, 185, 186, 187, 188, 189, 190, 210, 211, 212, 213, 214, 215, 216, 217, 221, 242, 243 |
| 3D-footprint Homologues: | 8cuc_F, 7y3l_A, 7n5w_A, 8ssq_A, 7w1m_H, 5k5l_F, 8ssu_A, 5v3j_F, 2i13_A, 5kkq_D, 5yel_A, 5ei9_F, 7eyi_G, 8h9h_G, 7y3m_I, 6e94_A, 2jpa_A, 6ml4_A, 6blw_A, 7ysf_A, 6wmi_A, 1yuj_A, 2kmk_A, 6jnm_A, 1tf3_A, 3uk3_C, 5k5i_A, 1tf6_A, 5und_A, 2gli_A, 1ubd_C, 4x9j_A, 1mey_C, 1f2i_J, 6u9q_A, 7txc_E, 5kl3_A, 2drp_D, 1g2f_F, 5yj3_D, 4m9v_C, 2lt7_A, 6a57_A, 1llm_D, 8gn3_A, 2wbs_A |
| Binding Motifs: | IKZF1_MOUSE.H10MO.C|M01169 yTGGGArr |
| Related annotations: | PaperBLAST |
Disclaimer and license
These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.