Transcription Factor
| Accessions: | T141347_1.02 (CISBP 1.02) |
| Names: | ppa000682m, T141347_1.02; |
| Organisms: | Prunus persica |
| Libraries: | CISBP 1.02 1 1 Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. [Pubmed] |
| Notes: | experiment type:PBM, family:SBP |
| Length: | 1037 |
| Pfam Domains: | 145-222 SBP domain |
| Sequence: (in bold interface residues) | 1 MEDVGGQVAAPIFIHQTLSGRFCDVPAMARKRDLPYQGSNYQHPHSQQPRFTTAGNNWNP 60 61 NVWDWDNVRFVAKPLDAEMLHLGSSRTEQGKKEEASGAVKNTAEDEDDESLQLNLAGGLT 120 121 SVEEPMPRPNKRVRSGSPGNGSYPMCQVDNCKEDLSNAKDYHRRHKVCEIHSKATKAPVA 180 181 KQMQRFCQQCSRFHPLSEFDEGKRSCRRRLAGHNRRRRKTQPEDVTSRLTLPGDGDTKSI 240 241 GNLDIVNLLAAIARPQGKNDVRNINCSSVLDREQLLQILSKINSLPLPADLAAKLPNLGS 300 301 LNRKAVELLALDLQNKLNGRTSASTVDLLTVLSATLAASSPEALAMLSQKSSQSSDSEKT 360 361 KLTCSDQAAGPNLHKIPTQEFNSAGGERSSTSYQSPMEDSDCQVQETRVNLPLQLFSSSP 420 421 ENDSPPKLASSRKYFSSDSSNPTEDRSPSSSPPVVQTLFPMKSMAETVKSEKLSISKEVN 480 481 ANPDSSRTRGCNMPFDLFRGSNRGADASSIQSFPHQAGYTSSGSDHSPSSLNSDPQDRTG 540 541 RILFKLFDKDPSHLPGSLRAQIYNWLSNSPSEMESYIRPGCVVLSVYVSMSSAAWEQFEG 600 601 NLGQRVSSLVQSSDSDFWRSGRFLVHTGRQLASHKDGKIRICKAWRSCSSPELISVSPLA 660 661 VVGGQETSLVLRGRNLTNLGTRIHCTYLGGYTSKEATGSTYHGTMYDEINLADATICREL 720 721 RLLESVFDAEAKACDVISEDENRDYGRPTSREEVLHFLNELGWLFQRKRICSMLQEPRCS 780 781 LSRFKFLLTFTVEKDCCVLVKTLLDILFERNLDGDGLSGESLGMLSDIQLLNRAVKRRCR 840 841 KMVDLLVNYSVISSDKRYIFPPNLAGPGGMTPLHLAACMSNTDDMIDALTNDPQEIGLNC 900 901 WNSLLDANGQSPYAYSLMRNNYSYNKLVARKLADRRNSQVTVTIGNEIEQPQMTMELEHR 960 961 TSTRFRQGSGSCAKCAMAASKYRRRVPGAQGLLQRPFIHSMLAIAAVCVCVCLFLRGSPD 1020 1021 IGLVAPFKWENLDFGTI |
| Interface Residues: | 793 |
| 3D-footprint Homologues: | 3iay_A |
| Binding Motifs: | M1572_1.02 ssssGTACgg |
| Related annotations: | PaperBLAST |
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.