Transcription Factor
| Accessions: | T049082_1.02 (CISBP 1.02) |
| Names: | Osr2, T049082_1.02; |
| Organisms: | Mus musculus |
| Libraries: | CISBP 1.02 1 1 Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. [Pubmed] |
| Notes: | experiment type:PBM, family:C2H2 ZF |
| Length: | 276 |
| Pfam Domains: | 172-194 C2H2-type zinc finger 172-194 Zinc finger, C2H2 type 186-210 Zinc-finger double domain 200-222 Zinc finger, C2H2 type 200-222 C2H2-type zinc finger 214-237 Zinc-finger double domain 228-250 Zinc finger, C2H2 type |
| Sequence: (in bold interface residues) | 1 MGSKALPAPIPLHPSLQLTNYSFLQAVNTFPAAVDHLQGLYGLSAVQTMHMNHWTLGYPS 60 61 VHEITRSTITEMAAAQGLVDARFPFPSLPFATHLFHPKQGAIAHVLPALHKDRPRFDFAN 120 121 LAVAATQEDPPKMGDLSKLSPGLGSPISGLSKLNPDRKPSRGRLPSKTKKEFICKFCGRH 180 181 FTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGFCQS 240 241 RTLAVHKTLHMQTSSPTAASSAAKCSGETAICGGTA |
| Interface Residues: | 44, 46, 152, 153, 154, 155, 157, 158, 161, 162, 172, 182, 183, 184, 185, 186, 188, 189, 190, 195, 196, 197, 209, 210, 211, 212, 213, 214, 215, 216, 217, 218, 221, 238, 239, 240, 241, 242, 243, 245 |
| 3D-footprint Homologues: | 4kdp_B, 6kdb_D, 2jpa_A, 1ubd_C, 2kmk_A, 6ml4_A, 8cuc_F, 7y3l_A, 6jnm_A, 3uk3_C, 7n5w_A, 1tf3_A, 1tf6_A, 2gli_A, 1g2f_F, 5kkq_D, 6u9q_A, 4x9j_A, 1llm_D, 5kl3_A, 5ei9_F, 2drp_D, 6blw_A, 5k5i_A, 4m9v_C, 5v3j_F, 8h9h_G, 2lt7_A, 7ysf_A, 6e94_A, 7y3m_I, 6a57_A, 7w1m_H, 1yuj_A, 5yel_A, 8ssq_A, 2wbs_A, 5yj3_D, 8gn3_A, 1f2i_J, 7txc_E |
| Binding Motifs: | M0396_1.02 aacrGtAGcw |
| Related annotations: | PaperBLAST |
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