Transcription Factor
| Accessions: | StCONSTANSlike1 (EEADannot 2025-01-07) |
| Names: | CONSTANS, PGSC0003DMP400017796, StCOL1 |
| Organisms: | Solanum tuberosum |
| Libraries: | EEADannot 2025-01-07 1 1 Contreras-Moreira B, Sebastian A. FootprintDB: Analysis of Plant Cis-Regulatory Elements, Transcription Factors, and Binding Interfaces. Methods Mol Biol 1482:259-77 (2016) [Pubmed] |
| Notes: | family:Heteromeric CCAAT-binding factors CONSTANS |
| Length: | 413 |
| Pfam Domains: | 61-106 B-box zinc finger 344-387 CCT motif |
| Sequence: (in bold interface residues) | 1 MLKKEKSGGFDGSSNNWARVCDSCHSATCTVYCRADSAYLCADCDARIHAASLMASRHER 60 61 VWVCEACERAPAAFLCKADAASLCASCDVDIHSANPLARRHHRVPIMPIPGTLYGPPAVH 120 121 TVSGGSMMIGGTTGEGTEDDGFLSLTQDADDTTIDEEDENEAASWLLLNPPVKNNNKNNI 180 181 NNNNNNQNNNYGMLFGGEVVDEYLDLAEYGGDSQFNDQYSVNQQQQHYSVPQKSYVEDSV 240 241 VPVQNGQRKSLILYHQPQQQQQQQQQSHHLNFQLGMEYDNSNTGYGYPASLSHSVSISSM 300 301 DVSVVPESALSETSNSHPRPPKGTIDLFSGPPIQIPPQLTPMDREARVLRYREKKKNRKF 360 361 EKTIRYASRKAYAETRPRIKGRFAKRTDVKAEVDQMFSTQLMTDSSYGIVPSF |
| Interface Residues: | 362, 369, 373, 376, 378, 382, 383 |
| 3D-footprint Homologues: | 7cvq_F, 7cvo_A, 7c9o_A |
| Binding Motifs: | EEAD0013 TGTGGTG |
| Binding Sites: | StCONSTANSlike1_1 StCONSTANSlike1_2 StCONSTANSlike1_3 StCONSTANSlike1_4 StCONSTANSlike1_5 StCONSTANSlike1_6 |
| Related annotations: | PaperBLAST |
Disclaimer and license
These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.