Transcription Factor

						

			
Accessions: AtMYB5 (AthaMYB 1.0)

			
Names: AtM2, AtMYB5, Myb-related protein 5, Transcription repressor MYB5
Organisms: Arabidopsis thaliana
Libraries: AthaMYB 1.0 1
1 Kelemen Z., Sebastian A., Xu W., Grain D., Salsac F., Avon A., Berger N., Tran J., Dubrecq B., Lurin C., Lepiniec L., Contreras-Moreira B., Dubos C. Analysis of the DNA-Binding Activities of the Arabidopsis R2R3-MYB Transcription Factor Family by One-Hybrid Experiments in Yeast. PLoS One 10, e0141044 (2015). [Pubmed]
Uniprot: Q38850
Length: 250
Pfam Domains:     25-72 Myb-like DNA-binding domain
    28-87 Myb-like DNA-binding domain
   79-123 Myb-like DNA-binding domain
   82-132 Myb-like DNA-binding domain
Sequence: 
(in bold interface residues)		   1 MMSCGGKKPVSKKTTPCCTKMGMKRGPWTVEEDEILVSFIKKEGEGRWRSLPKRAGLLRC   60
  61 GKSCRLRWMNYLRPSVKRGGITSDEEDLILRLHRLLGNRWSLIAGRIPGRTDNEIKNYWN  120
 121 THLRKKLLRQGIDPQTHKPLDANNIHKPEEEVSGGQKYPLEPISSSHTDDTTVNGGDGDS  180
 181 KNSINVFGGEHGYEDFGFCYDDKFSSFLNSLINDVGDPFGNIIPISQPLQMDDCKDGIVG  240
 241 ASSSSLGHD*
Interface Residues: 25, 60, 61, 62, 63, 65, 66, 69, 70, 71, 112, 113, 116, 117, 120, 121, 122, 129, 132, 134
3D-footprint Homologues: 1w0t_A, 3osg_A, 1vfc_A, 2kdz_A, 6kks_A, 1mse_C, 3zqc_A, 7xur_A, 4qju_B
Binding Motifs: AtMYB5_I wwmaGTTr
AtMYB5_II RbWdGTTR
Binding Sites: GTTAGTTA
AAAAGTTA
ACAAGTTA
AGGTTA
AGTAGTTA
ATTAGTTG
GCTTGTTG
GTCAGTTA
TACTGTTG
TGCGGTTG
			
Publications: Kelemen Z., Sebastian A., Xu W., Grain D., Salsac F., Avon A., Berger N., Tran J., Dubrecq B., Lurin C., Lepiniec L., Contreras-Moreira B., Dubos C. Analysis of the DNA-Binding Activities of the Arabidopsis R2R3-MYB Transcription Factor Family by One-Hybrid Experiments in Yeast. PLoS One 10, e0141044 (2015). [Pubmed]
Related annotations: PaperBLAST

	
			


			

				

				
				
				
				

			

			

		

	
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