Transcription Factor
| Accessions: | T073835_1.02 (CISBP 1.02) |
| Names: | BRADI1G55710, T073835_1.02; |
| Organisms: | Brachypodium distachyon |
| Libraries: | CISBP 1.02 1 1 Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. [Pubmed] |
| Notes: | experiment type:PBM, family:CxC |
| Length: | 787 |
| Pfam Domains: | 473-511 Tesmin/TSO1-like CXC domain 558-596 Tesmin/TSO1-like CXC domain |
| Sequence: (in bold interface residues) | 1 MDTPDRAALPASSRAEDSPLFGFIDSMSPIEPLKSAYSTNSLQAYQSLSITSISSIFTSP 60 61 HHNTQKESKLSKSSFADFNESEVCTDHSDKNKPPSSSNAVRLFACTSSITEETHTATSSV 120 121 NEGIVDPAKGPNDLPQPGRFESGSPDHNTTPCHGVRSDLKQDKRRKSEAVQTNKNTLENR 180 181 KCLFSSNIQLPDGCQPEEGNGEVLGCDWEDLVSATSGELLAFDDTSTVEDHGGVRLAVNN 240 241 AESCGFLLSELNGGCDISDRTHPIGTSQVYYHEMVMEEDKTENAQFFSEGQKTMSGEEMQ 300 301 DNLNEDNACIPLGCKVETHQQRGTRKRCLVFEAAGYSNRTVQKESVGDLTVSKLKGKSVA 360 361 QNHTNPGKTPSPRVLRGIGLHLNALALTSKDKIVCQDPLSTALVPSVKTEQDMHGNLLSA 420 421 GENFVHSSGELLDLQMDNDDCLAGGFLGNDHISSQSSSPQKKRRKSDNGDDESCKRCSCK 480 481 KSKCLKLYCECFAAGVYCSEPCSCLGCLNKPIHEEIVLSTRKQIEFRNPLAFAPKVIRLS 540 541 DAGQETQEDPNNTPASARHKRGCNCKKSSCLKKYCECYQGGVGCSSNCRCESCKNTFGMR 600 601 DGAVSVENEEMKQGGEQTESCGKEKENDEQKANVHNGDHQLVELGVPITPPLAISSSLLQ 660 661 QPNFSNAKPPRPSKPRTGSSSRPSKAAASVLSHKIPKVANSVFNEEVPDILTEPASPGIV 720 721 KTSSPNGKRVSPPHNSLSISPSRRGGRKLILKSIPSFPSLLGDTSSGSAISNSNSAFTES 780 781 SLALGPP |
| Interface Residues: | 488, 574 |
| 3D-footprint Homologues: | 5fd3_A |
| Binding Motifs: | M0592_1.02 mrTtyraAyk |
| Related annotations: | PaperBLAST |
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.