Transcription Factor

						

			
Accessions: T027709_1.02 (CISBP 1.02)

			
Names: NCU06965, T027709_1.02;
Organisms: Neurospora crassa
Libraries: CISBP 1.02 1
1 Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. [Pubmed]
Notes: experiment type:PBM, family:bZIP
Length: 359
Pfam Domains:   239-307 Ankyrin repeats (3 copies)
  247-284 Ankyrin repeats (many copies)
  247-271 Ankyrin repeat
  247-292 Ankyrin repeats (many copies)
  248-274 Ankyrin repeat
  248-337 Ankyrin repeats (3 copies)
  275-317 Ankyrin repeats (many copies)
  277-308 Ankyrin repeat
  277-304 Ankyrin repeat
  279-327 Ankyrin repeats (many copies)
Sequence: 
(in bold interface residues)		   1 MEQSTDKMTIETTSAVEKTPSPKPAVNDRRKLQNRIAQRRFRQKKAMEARAASLQAEGIW   60
  61 HEYFNLHPQYAGNYEVPYLGPSVPTSPTDVPQQGWQPTIEYQIGAWDNQLFGSDNFRLSN  120
 121 PPTDIVAPMSPPNSSASSSVSPDGSVYGGEAPSKSSYFPLRDQEGYPFSMQPNQLFCDGM  180
 181 FSGAPLDISGSISSTSHHGLSNDAPLGENTDAQLQDQVATKWNTHEPAQSTSSCTWTSSD  240
 241 GEPWEPLLHTAAKNGNCGIILMLLDHNVDVNERNSSGMTALHVAIENSQEDVIMLLLQRG  300
 301 VDVNVEDNSHRTALSMAVSNNSESGVRLCLLHGAGLKLAKASSFGGSLGNQGGGVTVDV
Interface Residues: 30, 33, 34, 35, 37, 38, 41, 42, 254
3D-footprint Homologues: 1gd2_G, 8ipp_B
Binding Motifs: M0336_1.02 haGTAAGCAr
			
Related annotations: PaperBLAST

	
			


			

				

				
				
				
				

			

			

		

	
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.