Transcription Factor
| Accessions: | T105185_1.02 (CISBP 1.02) |
| Names: | POU2F3, T105185_1.02; |
| Organisms: | Takifugu rubripes |
| Libraries: | CISBP 1.02 1 1 Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. [Pubmed] |
| Notes: | experiment type:PBM, family:Homeodomain,POU |
| Length: | 401 |
| Pfam Domains: | 163-236 Pou domain - N-terminal to homeobox domain 260-316 Homeobox domain |
| Sequence: (in bold interface residues) | 1 MSADTVEQSDAQAEQAGKDNSPFNYARQIKTEDIHDSHHSSASLKTCHMTQSAPMPGGQL 60 61 TGELSSLHTMQQLVLMPPSHLSSPSPFLLSQSPAATKTALLQQNLLSIPGQSQSGLLHQH 120 121 QPGLALTPQAMSRNGLAGPPMENHMDMSHLQMPKHMSVPPQEEPSDLEELEQFAKAFKQR 180 181 RIKLGFTQGDVGLAMGKLYGNDFSQTTISRFEALNLSFKNMCKLKPLLEKWLSDAENSPS 240 241 DSMSNPTTMPPLIEGYGRKRKKRTSIETNIKLTLEKRFLDNPKPNSEEITLISEQLSMEK 300 301 EVVRVWFCNRRQKEKRIYCPVTSLSVKSHNYNSRMASASRPYSPMAPGGVSSSSSPNNIS 360 361 REASPNTLSAISSSLTSQINPASYNTAGSWYRTWNSAAYHH |
| Interface Residues: | 188, 204, 205, 206, 207, 209, 210, 216, 220, 260, 261, 262, 263, 301, 302, 304, 305, 308, 309, 311, 312, 313, 316 |
| 3D-footprint Homologues: | 8bx1_A, 7u0g_M, 3d1n_M, 1e3o_C, 1au7_A, 1o4x_A, 7xrc_C, 8g87_X, 2xsd_C, 1ig7_A, 5zjt_E, 8ejp_B, 6a8r_A, 3cmy_A, 8pmf_A, 1fjl_B, 1puf_A, 1jgg_B, 2lkx_A, 1nk2_P, 1zq3_P, 2ld5_A, 7q3o_C, 6es3_K, 3rkq_B, 8ik5_C, 3a01_E, 1puf_B, 8osb_E, 5hod_A, 8eml_B, 2r5y_A, 2hdd_A, 1b72_A, 7psx_B, 4xrs_G, 9b8u_A, 5jlw_D, 1le8_A, 1mnm_C, 1du0_A, 5flv_I, 4cyc_A, 1k61_B, 4qtr_D |
| Binding Motifs: | M1240_1.02 awtwwgmATa |
| Related annotations: | PaperBLAST |
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