Transcription Factor
| Accessions: | T000641_1.02 (CISBP 1.02) |
| Names: | RAP2.2, T000641_1.02; |
| Organisms: | Arabidopsis thaliana |
| Libraries: | CISBP 1.02 1 1 Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. [Pubmed] |
| Notes: | experiment type:PBM, family:AP2 |
| Length: | 374 |
| Pfam Domains: | 122-171 AP2 domain |
| Sequence: (in bold interface residues) | 1 MCGGAIISDFIPPPRSLRVTNEFIWPDLKNKVKASKKRSNKRSDFFDLDDDFEADFQGFK 60 61 DDSAFDCEDDDDVFVNVKPFVFTATTKPVASAFVSTGSAYAKKTVESAEQAEKSSKRKRK 120 121 NQYRGIRQRPWGKWAAEIRDPRKGSREWLGTFDTAEEAARAYDAAARRIRGTKAKVNFPE 180 181 EKNPSVVSQKRPSAKTNNLQKSVAKPNKSVTLVQQPTHLSQQYCNNSFDNSFGDMSFMEE 240 241 KPQMYNNQFGLTNSFDAGGNNGYQYFSSDQGSNSFDCSEFGWSDHGPKTPEISSMLVNNN 300 301 EASFVEETNAAKKLKPNSDESDDLMAYLDNALWDTPLEVEAMLGADAGAVTQEEENPVEL 360 361 WSLDEINFMLEGDF |
| Interface Residues: | 127, 129, 130, 131, 135, 137, 139, 144, 146, 148, 241, 244, 245, 263 |
| 3D-footprint Homologues: | 1gcc_A, 7wq5_A, 5wx9_A, 7et4_D, 6xl5_H |
| Binding Motifs: | M0021_1.02 wkgcyGsc |
| Related annotations: | PaperBLAST |
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