Transcription Factor

						

			
Accessions: T057755_1.02 (CISBP 1.02)

			
Names: CG11071, T057755_1.02;
Organisms: Drosophila melanogaster
Libraries: CISBP 1.02 1
1 Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. [Pubmed]
Notes: experiment type:B1H, family:C2H2 ZF
Length: 802
Pfam Domains:   330-349 C2H2-type zinc finger
  363-383 C2H2-type zinc finger
  396-418 C2H2-type zinc finger
  718-740 Zinc finger, C2H2 type
  718-740 C2H2-type zinc finger
  732-755 Zinc-finger double domain
  746-768 Zinc finger, C2H2 type
  746-768 C2H2-type zinc finger
  760-784 Zinc-finger double domain
  774-796 Zinc finger, C2H2 type
  774-796 C2H2-type zinc finger
Sequence: 
(in bold interface residues)		   1 MSAMAASRCPTPFAFPFSPLGLSLFDIDPSRILSLLHHQTWLAEEALRTRGLLTAPKDFP   60
  61 HRFTTLSDLLTKDYQPGAGQPMVTATATATTASSTSQVSASRSGDTQYNKHAQQPQQPQT  120
 121 GGATGSGVGGLGGSPTAGASFNLRYPTPTAFYQQQQQQGKGAKSSPSPQQMATSSTTVMS  180
 181 NDSGEDSCKRSSADSDEVTIMELPSERSAQLYKESLEQLLQRQRRTPILAGSGSGSGSGT  240
 241 GSGSVIVDAAGLRQYTQLLLAGAGSGGASDLKEKSSSSSTSSTPPLLTQQLSQMLKSPSD  300
 301 TCSSLFSSSGGGTGSTGPGITGETIEEETRCVVCNAHFPNVWLLEQHAALQHPHVGPGEE  360
 361 KPFICEQCGQSYRYRSAYAKHKEQNHRARLPADKLFTCDVCGMQFRYLKSFKKHRLNHAL  420
 421 ERLHGKKSVGVIGRLGGSGSGPSSSAISVSVAAPTSVSASGSVTSVDQDVVTSSQEPMLA  480
 481 DEGEDLRVNVKREGTADEQSAESRANDLEEHEQDNTVDSAGITMLYQDNNSSASASTSAT  540
 541 EPNISSSDGIHSTNKRSRLHHLETDPSYPHHHHHHHHHHHQQQHHQAQHQHHNPQSQLPT  600
 601 HLGHVSLPLVATSAAGSSSSAAAAAVVAAAQAQVSSGATGSGATGSGAPGSGNVGSAGSS  660
 661 GAGGGISSLSSLTSLINAERIPNEQFLGLNPQEASILNFLRVDAAERQRDKRPATSRFAC  720
 721 PFCGKCVRSKENLKLHVRKHTGERPFVCLFCGRAFGGKSDLTRHLRIHTGERPYHCESCG  780
 781 KCFARADYLSKHLTTHIHNAPR
Interface Residues: 667, 671, 694, 699, 703, 704, 706, 709, 710, 713, 718, 728, 729, 730, 731, 732, 734, 735, 737, 738, 741, 756, 757, 758, 759, 760, 761, 762, 763, 764, 767, 784, 785, 786, 787, 788, 789, 790, 791, 792, 796
3D-footprint Homologues: 7w1m_H, 2gli_A, 8ssq_A, 8ssu_A, 2kmk_A, 7n5w_A, 6jnm_A, 3uk3_C, 1tf3_A, 8cuc_F, 7y3l_A, 5ei9_F, 1g2f_F, 5kl3_A, 1ubd_C, 5k5i_A, 7ysf_A, 6blw_A, 5k5l_F, 6u9q_A, 5yel_A, 4x9j_A, 5kkq_D, 1tf6_A, 8h9h_G, 7y3m_I, 2lt7_A, 6e94_A, 6a57_A, 6ml4_A, 2jpa_A, 5yj3_D, 7txc_E, 1llm_D, 5v3j_F, 2drp_D, 1f2i_J, 2wbs_A, 8gn3_A, 4m9v_C
Binding Motifs: M4803_1.02 kmwrTAGGCkkr
			
Related annotations: PaperBLAST

	
			


			

				

				
				
				
				

			

			

		

	
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