Transcription Factor

						

			
Accessions: OsCBT (Athamap 20091028)

			
Names: OsCBT
Organisms: Oryza sativa
Libraries: Athamap 20091028 1
1 Bulow L, Engelmann S, Schindler M, Hehl R. AthaMap, integrating transcriptional and post-transcriptional data. Nucleic acids research 37:D983-6 (2009).  [Pubmed]
Length: 927
Pfam Domains:    29-146 CG-1 domain
  561-638 Ankyrin repeats (3 copies)
  610-660 Ankyrin repeats (many copies)
  610-641 Ankyrin repeat
  610-637 Ankyrin repeat
  778-796 IQ calmodulin-binding motif
  801-820 IQ calmodulin-binding motif
  884-903 IQ calmodulin-binding motif
Sequence: 
(in bold interface residues)		   1 MAGAGGWDPLVGSEIHGFLTYPDLNYDKLVAEAAARWFRPNEIYAILANHARFKIHAQPV   60
  61 DKPVSGTVVLYDRKVVRNFRKDGHNWKKKKDGRTVQEAHEKLKIGNEERVHVYYARGEND  120
 121 PNFFRRCYWLLDKDLERIVLVHYRQTAEENAMVLPNPEPEVADVPTVNLIHYTFLLTSAD  180
 181 STSGHTELSLPEEINSHGGISASSETGNHDSSLEEFWANLLESSIKNDPKVVTSACGGSF  240
 241 VSSQQINNGPKNSGNIVNTSMASNAIPALNVVSETYATNHGLNQVNANHFGALKHQGDQT  300
 301 QSLLASDVDSQSDQFISSSVKSPMDGNTSIPNEVPARQNILGLWNYLDDDSPGLGDNPSS  360
 361 VPQSFCPVTNERLLEINEISPEWAYSTDTTKVVVIGNFYEQYNHLAGSAMFGVFGEQCVA  420
 421 GDIVQTGVYRFMVGPHTPGKVDFYLTLDGKTPISEICSFTYHVMHGSSLEARLPPSEDDY  480
 481 KRTNLKMQMRLARLLFATNKKKIAPKLLVEGTKVANLMSALPEKEWMDLWNILSDPEGTY  540
 541 VPVTESLLELVLRNRLQEWLVEMVMEGHKSTGRDDLGQGAIHLCSFLGYTWAIRLFSLSG  600
 601 FSLDFRDSSGWTALHWAAYHGRERMVATLLSAGANPSLVTDPTPESPAGLTAADLAARQG  660
 661 YDGLAAYLAEKGLTAHFEAMSLSKDTEQSPSKTRLTKLQSEKFEHLSEQELCLKESLAAY  720
 721 RNAADAASNIQAALRERTLKLQTKAIQLANPEIEASEIVAALKIQHAFRNYNRKKAMRAA  780
 781 ARIQSHFRTWKMRRNFINMRRQVIRIQAAYRGHQVRRQYRKVIWSVGIVEKAILRWRKKR  840
 841 KALRGIASGMPVVMTVDAEAEPASTAEEDFFQAGRQQAEDRFNRSVVRVQALFRSYKAQQ  900
 901 EYRRMKIAHEEAKIEFSEGQLGAACRS
Interface Residues: 831, 832, 835, 836, 838, 839
3D-footprint Homologues: 1z19_B, 5j0n_F
Binding Motifs: OsCBT tmCGyGTkkkkTkCG
			
Publications: Choi MS, Kim MC, Yoo JH, Moon BC, Koo SC, Park BO, Lee JH, Koo YD, Han HJ, Lee SY, Chung WS, Lim CO, Cho MJ. 2005. Isolation of a calmodulin-binding transcription factor from rice (Oryza sativa L.). J Biol Chem 280: 40820-31.  [Pubmed]
Related annotations: PaperBLAST

	
			


			

				

				
				
				
				

			

			

		

	
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.