Transcription Factor

						

			
Accessions: T116514_1.02 (CISBP 1.02)

			
Names: PK19779.1, T116514_1.02;
Organisms: Cannabis sativa
Libraries: CISBP 1.02 1
1 Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. [Pubmed]
Notes: experiment type:PBM, family:Myb/SANT
Length: 390
Pfam Domains:   224-275 Myb-like DNA-binding domain
Sequence: 
(in bold interface residues)		   1 IFFSFLSFYQSVKEKMQCSSGMGFEEYIEALEVERKKIQVFQRELPLCLELVNQTIDRCK   60
  61 QQLSGTTTTEYVHGQSECSEQTSSEGHHVFEEFMPLKRSSSSDNEEEEEKEEQSPKRQTT  120
 121 EKDNKKKSDWLRSVQLWNTTPDPVSPQKEEQLPKKASVTEVKSNGGAFQPFQREKNVVKP  180
 181 NGSSSSACTTTNPVASAPATSSNAGGGSNKREEDKDGQNQRKQRRNWSPELHKRFLNALQ  240
 241 QLGGSHAATPKQIRELMKVDGLTNDEVKSHLQKYRLHTRRPTPAIHNNGNAQTPQVVFVG  300
 301 GIWMQPSEYAATVGGNGDSPSAVAANGIYAPVAAPAHHVAAVHRQSSENSHNNSEERRMS  360
 361 HNSHSEGGVHSNNSPSTSSSTHTTTTSPAF
Interface Residues: 224, 264, 265, 268, 269, 272, 273
3D-footprint Homologues: 6j5b_C, 6qec_A, 7d3t_D
Binding Motifs: M1310_1.02 wakATwCyvy
			
Related annotations: PaperBLAST

	
			


			

				

				
				
				
				

			

			

		

	
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