Transcription Factor
| Accessions: | 7ce1_O (3D-footprint 20231221) |
| Names: | A0A2I4PGE9_RHIRD, Fragment, LacI-type transcription factor |
| Organisms: | Agrobacterium tumefaciens A6 |
| Libraries: | 3D-footprint 20231221 1 1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed] |
| Uniprot: | A0A2I4 |
| Length: | 320 |
| Pfam Domains: | 4-49 Bacterial regulatory proteins, lacI family 75-272 Periplasmic binding proteins and sugar binding domain of LacI family 171-313 Periplasmic binding protein-like domain |
| Sequence: (in bold interface residues) | 1 ERPTLKTIAYMTGLGITTVSRALKDAPDIGAETKERVRLIAQQIGYQPNRAGVRLRTGKT 60 61 NVIALVLSVDEELMGFTSQMVFGITEVLATTQYHLVVTPHTHAKDSMVPIRYILETGSAD 120 121 GVIISKIEPNDPRVRFMTERKMPFVTHGRSDMGIEHAYHDFDNEAYAYEAVERLAQCGRK 180 181 RIIVPPSRFAFHDHARKGFTRGIRDFGVSEFPLDAITIETPLDKIRDFGKRLMQSDDRPI 240 241 VSISGSSTIALVAGFEAAGVRIGKDIDSKQSAEFLNWIQPQIHTVNEDIKLAGRELAKAL 300 301 LARINPPETLQSVSRPVWSS |
| Interface Residues: | 5, 6, 15, 16, 17, 18, 20, 21, 27, 28, 29, 52, 55, 56 |
| 3D-footprint Homologues: | 3oqm_C, 7ce1_D, 1efa_B, 1l1m_B, 1jft_A, 1zvv_A |
| Binding Motifs: | 7ce1_OP TCTGCAACGTTGCAGA |
| Publications: | Ye F, Wang C, Fu Q, Yan XF, Bharath SR, Casanas A, Wang M, Song H, Zhang LH, Gao YG. Structural basis of a novel repressor, SghR, controlling Agrobacterium infection by cross-talking to plants. J Biol Chem 295:12290-12304 (2020). [Pubmed] |
| Related annotations: | PaperBLAST |
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.