Transcription Factor

						

			
Accessions: T161770_1.02 (CISBP 1.02)

			
Names: NCU04960, T161770_1.02;
Organisms: Neurospora crassa
Libraries: CISBP 1.02 1
1 Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. [Pubmed]
Notes: experiment type:PBM, family:Zinc cluster
Length: 310
Pfam Domains:   234-264 Fungal Zn(2)-Cys(6) binuclear cluster domain
Sequence: 
(in bold interface residues)		   1 MEQPQVKIIGGREYAATGSKFGPSYLPVDVMARMNNSAHQGLAMSAVVHDKRSLNSEAPA   60
  61 REPLSGVDTRKHLTMPSPERGPVASTFRPLPKIPKANDQGSVNSFVLPIRMANNPMEAAM  120
 121 VCFFNSVTDSSRTRFEDLLANMVGQTSTTVNSGSDSSTANNGNGDGSGDGAASSSATTTT  180
 181 TTAADTTSTNSSNIGTPRRRRAAGGGSGGSGRKPGGTPRKKPASRADVIEKRGSCERCKK  240
 241 SKAKCEPIPECIRCAKDGVECSLKETIMQETGRRLGACQRCKKNKVGCKKIESCGRCHKA  300
 301 EQPCSWAVKA
Interface Residues: 241, 242, 243, 260, 262, 265, 284, 285, 286, 287, 289, 290
3D-footprint Homologues: 2er8_C, 1hwt_C, 7uik_T, 1d66_B, 3coq_A, 6ml4_A, 1pyi_A
Binding Motifs: M1741_1.02 gtkCCGGmcsg
			
Related annotations: PaperBLAST

	
			


			

				

				
				
				
				

			

			

		

	
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