Transcription Factor

						

			
Accessions: T090521_1.02 (CISBP 1.02)

			
Names: ATEG_00670, T090521_1.02;
Organisms: Aspergillus terreus
Libraries: CISBP 1.02 1
1 Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. [Pubmed]
Notes: experiment type:PBM, family:Homeodomain
Length: 483
Pfam Domains:   128-167 Homeobox KN domain
  134-167 Homeobox domain
  312-335 C2H2-type zinc finger
Sequence: 
(in bold interface residues)		   1 MEDVHHHVPQICDVLSLPHLEATGTYQNHDDIDSLLNQIVEEQSHSAVDFDTASSQIHGN   60
  61 FVNLPLGDFNWDPWSSCQIDFAEGLDSTQDLVSNASFQSDTRRPDEAVVKTKTYQRLPPQ  120
 121 AVKVLRAWLYQHREYPYPTDREKEELAEQTGLDKTQISNWFSNTRRRKLTRLPSMDDPPV  180
 181 DVSLLSPLERWRNSPPESEAAATSDIVRALADSTPYSGSDCSTAYTNNAPDAWSSNGSSN  240
 241 SFVVGAPSVSSFEHSQHSQSSNSEISFSQSRRALRRPPTPIPISMGSRRRRRPRKSATTW  300
 301 NRRSAAHGKRAYQCTFCSDTFRTKYDWQRHEKALHIPVDTWCCAPHGGIVEVDGSKVCAF  360
 361 CQATDADYAHLEAAHNYLLCREKGPEQRAFLRKDHLKQHLKLTHNVDYHASMDAWRSSRT  420
 421 DIVSRCGFCDARLSTWDERVEHLADHFKNGVDMDQWKGGRRMRLGPPGTKRSLGFLRRTS  480
 481 PTD
Interface Residues: 111, 114, 115, 116, 144, 153, 154, 155, 156, 158, 159, 162, 163, 166, 167, 169, 171, 323, 326, 329
3D-footprint Homologues: 3d1n_M, 1k61_B, 1le8_B, 1mnm_C, 8igr_C, 5jlw_D, 7xrc_C, 1e3o_C, 1le8_A, 2xsd_C, 1au7_A, 7q3o_C, 1ig7_A, 1du0_A, 6a8r_A, 4cyc_A, 2hdd_A, 6fqq_E, 5hod_A, 1o4x_A, 8g87_X, 4qtr_D, 3l1p_A, 1puf_B, 1fjl_B, 6es3_K, 4xrm_B, 5zfz_A, 3lnq_A, 2d5v_B, 6fqp_B, 4xrs_G, 3cmy_A, 2hos_A, 6m3d_C, 6e94_A
Binding Motifs: M0867_1.02 artkACryg
			
Related annotations: PaperBLAST

	
			


			

				

				
				
				
				

			

			

		

	
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.