Transcription Factor

						

			
Accessions: T049086_1.02 (CISBP 1.02)

			
Names: T049086_1.02;, Zfp263
Organisms: Mus musculus
Libraries: CISBP 1.02 1
1 Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. [Pubmed]
Notes: experiment type:PBM, family:C2H2 ZF
Length: 392
Pfam Domains:    89-110 C2H2-type zinc finger
   91-112 C2H2-type zinc finger
   92-112 Zinc finger, C2H2 type
  146-168 Zinc finger, C2H2 type
  146-168 C2H2-type zinc finger
  160-185 Zinc-finger double domain
  174-196 C2H2-type zinc finger
  174-196 Zinc finger, C2H2 type
  174-196 C2H2-type zinc finger
  188-213 Zinc-finger double domain
  201-222 C2H2-type zinc finger
  202-224 Zinc finger, C2H2 type
  202-224 C2H2-type zinc finger
  216-241 Zinc-finger double domain
  230-241 C2H2-type zinc finger
  230-252 Zinc finger, C2H2 type
  230-252 C2H2-type zinc finger
  276-294 Zinc-finger double domain
  283-306 C2H2-type zinc finger
  284-306 Zinc finger, C2H2 type
  284-306 C2H2-type zinc finger
  298-323 Zinc-finger double domain
  312-334 C2H2-type zinc finger
  312-332 C2H2-type zinc finger
  312-334 Zinc finger, C2H2 type
  326-351 Zinc-finger double domain
  339-362 C2H2-type zinc finger
  340-362 C2H2-type zinc finger
  340-362 Zinc finger, C2H2 type
  357-378 Zinc-finger double domain
  367-390 C2H2-type zinc finger
  368-390 C2H2-type zinc finger
  368-390 Zinc finger, C2H2 type
Sequence: 
(in bold interface residues)		   1 MNPRNPVPGVEKFENQERNVESVSPESTHPPVLLPGQARREVPWSPEQGRLDDREGHWEC   60
  61 PPEDKIEESLVGTPSCKGLVQAKEQPKKLHLCALCGKNFSNNSNLIRHQRIHAAEKLCMD  120
 121 VECGEVFGGHPHFLSLHRTHIGEEAHKCLECGKCFSQNTHLTRHQRTHTGEKPFQCNACG  180
 181 KSFSCNSNLNRHQRTHTGEKPYKCPECGEIFAHSSNLLRHQRIHTGERPYRCSECGKSFS  240
 241 RSSHLVIHERTHEKERLDPFPECGQGMNDSAPFLTNHRVEKKLFECSTCGKSFRQGMHLT  300
 301 RHQRTHTGEKPYKCILCGENFSHRSNLIRHQRIHTGEKPYTCHECGDSFSHSSNRIRHLR  360
 361 THTGERPYKCSECGESFSRSSRLTSHQRTHTG
Interface Residues: 101, 103, 107, 128, 129, 131, 132, 135, 156, 157, 158, 159, 160, 162, 163, 165, 166, 169, 184, 185, 186, 187, 188, 190, 191, 192, 194, 195, 212, 213, 214, 215, 216, 217, 218, 219, 220, 222, 240, 241, 242, 243, 244, 247, 269, 270, 271, 272, 275, 278, 284, 294, 295, 296, 297, 298, 301, 307, 321, 322, 323, 324, 325, 326, 328, 329, 333, 350, 351, 352, 353, 354, 355, 357, 378, 379, 380, 381, 382, 384, 385
3D-footprint Homologues: 7w1m_H, 6wmi_A, 1tf6_A, 1tf3_A, 8cuc_F, 7y3l_A, 7n5w_A, 5ei9_F, 5kl3_A, 8ssq_A, 1g2f_F, 8ssu_A, 6ml4_A, 5v3j_F, 4x9j_A, 2i13_A, 5kkq_D, 1ubd_C, 8h9h_G, 7eyi_G, 6e94_A, 7ysf_A, 7y3m_I, 2jpa_A, 6u9q_A, 1mey_C, 5und_A, 5k5l_F, 1llm_D, 6blw_A, 4m9v_C, 2lt7_A, 2drp_D, 1f2i_J, 5yj3_D, 8gn3_A, 2wbs_A, 5yel_A, 2kmk_A, 3uk3_C, 5k5i_A, 2gli_A, 6jnm_A, 6a57_A, 7txc_E
Binding Motifs: M0397_1.02 gGGAGsAC
			
Related annotations: PaperBLAST

	
			


			

				

				
				
				
				

			

			

		

	
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