Transcription Factor

						

			
Accessions: T155964_1.02 (CISBP 1.02)

			
Names: BC1G_11044, T155964_1.02;
Organisms: Botryotinia fuckeliana
Libraries: CISBP 1.02 1
1 Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. [Pubmed]
Notes: experiment type:PBM, family:Zinc cluster
Length: 763
Pfam Domains:     36-69 Fungal Zn(2)-Cys(6) binuclear cluster domain
  276-455 Fungal specific transcription factor domain 
Sequence: 
(in bold interface residues)		   1 MQNFSFAPTNFGPRENQKNYVFVDEHNRHKRLKVMRACEGCRRRKIKCDAATTNTWPCSA   60
  61 CTRLKLGCVPPTVNYDRDFQQSNQTFEAEAPQYDNGGNPSGSYHQQVPVQQQMTGPSKVV  120
 121 PPIYTQQPPYPDPNNMYQSIPYGGPSSAHSHQSMHYNSLQTPVSALSQHTEYSPQAVYPT  180
 181 APLQQQTHDSPENYTHSEYSGEDLADLLGELKMNPAGTAPYLNNKNRTRGLVEEPAFEDI  240
 241 DEYKNALPPITLSADMKIRIPPELLPDEQTILHYFEMYFTNVHPYVPVLNKTLFYQQWHT  300
 301 NRDAISPLILEAIFAIAGRLDDEPAQGHQWLALASKHADAFMDVPRLSTLQANLIILKAR  360
 361 ESAPKRGYYYRSWMTVVACVQMAKDLGLDEHYEDHKAGRSCNSDLADCITKTRIWQTIFV  420
 421 CELMIGSPQGRTDLAVDMETLDLSVPRTGIDSGELAITRNFTWFTRVVRNVRRMNNVYAK  480
 481 VKKRKEWGIDPDFVAITSPDPDLNSDAREYFTRHMRILEKCTSSWPMPDMQQQIESLRLA  540
 541 FSADIRKPFVLKPSFPYGSPAAPPNTSPARGNIQQYRQGSTSLESQNLGHQNAQQQVSYT  600
 601 SHPISPPISAGGVDTKSDSPAVQSLVMMATGQRPPVPITNGLPMADNSTWNPSRIFDQWN  660
 661 STFGTPPASSSSASETTPPLKTPSSGAQELPTLPEMQILPNVSLPPGSQPMPPQQYSGAP  720
 721 IPSFVSPSMWQESVANVYESGIKRHWDYSDPNEMVNPIAKRRG
Interface Residues: 31, 32, 33, 37, 42, 44, 45, 46, 47, 63, 64, 81
3D-footprint Homologues: 2hap_D, 1f5e_P, 6o19_A, 1pyi_A, 2er8_C, 6gys_C, 1zme_D
Binding Motifs: M1705_1.02 cyCCGrrv
			
Related annotations: PaperBLAST

	
			


			

				

				
				
				
				

			

			

		

	
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.