Transcription Factor

						

			
Accessions: T110402_1.02 (CISBP 1.02)

			
Names: 29929.m004704, T110402_1.02;
Organisms: Ricinus communis
Libraries: CISBP 1.02 1
1 Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. [Pubmed]
Notes: experiment type:PBM, family:MADF
Length: 398
Pfam Domains:    84-151 Myb/SANT-like DNA-binding domain
   87-171 Myb/SANT-like DNA-binding domain
Sequence: 
(in bold interface residues)		   1 MYLSEKTRPIDFYKEEVAPTATRENMIIEVVSTNGELPPHQQHHHIHNPHNPQPQQQQQQ   60
  61 QQQQMILGESSGEDTHEVKAPKKRAETWVQDETRSLIGLRREMDGLFNTSKSNKHLWESI  120
 121 SSKMREKGFDRSPTMCTDKWRNLLKEFKKARHQERGSGSAKMSYYKEIDEILRERSKNAQ  180
 181 YKSPTPTSKVDSFMQFADKGFDDTSISFGPVEASGRPTLNLERRLDHDGHPLAITAADAV  240
 241 AASGVPPWNWRETPGSGAEGQSFGGRVITVKYGDYTRRIGIDGTADAIREAVKSAFRLRT  300
 301 KRAFWLEDEDQIIRSLDRDMPVGNYTLHLDEGLAIKVCLYDESDHIPVHTEEKVFYTEDD  360
 361 YREFLVRRGWTCLREFDGYRNIDNMDDLRPGVIYRGSS
Interface Residues: 114, 137, 138, 139, 302
3D-footprint Homologues: 2h8r_B, 3hqg_A, 1w0t_A
Binding Motifs: M1290_1.02 kggttaaccm
			
Related annotations: PaperBLAST

	
			


			

				

				
				
				
				

			

			

		

	
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