Transcription Factor

						

			
Accessions: Q2R3N4 (JASPAR 2024)

			
Names: cDNA, clone: J075106F03, full insert sequence, NAM protein, No apical meristem protein, Os11g0512100 protein, Q2R3N4_ORYSJ
Organisms: Oryza sativa
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Uniprot: Q2R3N4
Length: 277
Pfam Domains:    19-141 No apical meristem (NAM) protein
Sequence: 
(in bold interface residues)		   1 MASPGVCINLVNGTSTRLPTNADLVVHYLHRRAIQEPVPCDFITNVDILQHNPWDIVPAE   60
  61 EKTNGKYFFIHEENERLGNHHSNRAAGDGFWRPVGSEVPIYHKRSGGADEALVGMKRTLV  120
 121 FHYGNSSSAKRTEWVMQEFRLAGATLIPCPVTRPATGDGSMLPCHRTGTTIATENNGSPS  180
 181 AGQTHGPLEKTMVEPDSSLRICRIYKKRQRTPQFIIPPSIGDARELILALPTIGNTREVA  240
 241 LALPAIDFLGQPSFEEGSDVSADVITDDKDGYGHGMN
Interface Residues: 76, 81, 83, 92, 94, 96, 122, 126, 127, 128, 131
3D-footprint Homologues: 7xp3_B, 3swp_A
Binding Motifs: UN0428.1 ywGCTGCCcc
UN0429.1 rgAGGAAGAyv
UN0430.1 dgAAGAAAAGgr
UN0428.2 GCTGCCc
UN0429.2 AGGAAGA
UN0430.2 AAGAAAAG
Binding Sites: UN0429.2.8
UN0430.2.19 / UN0430.2.9
UN0428.1.1 / UN0428.1.2 / UN0428.1.3
UN0428.1.10 / UN0428.1.14
UN0428.1.11 / UN0428.1.16
UN0428.1.12 / UN0428.1.18
UN0428.1.13 / UN0428.1.20
UN0428.1.14
UN0428.1.15 / UN0428.1.16
UN0428.1.17
UN0428.1.18
UN0428.1.19
UN0428.1.20
UN0428.1.11 / UN0428.1.4 / UN0428.1.5 / UN0428.1.6 / UN0428.1.9
UN0428.1.6 / UN0428.1.7
UN0428.1.7 / UN0428.1.8
UN0428.1.8 / UN0428.1.9
UN0429.1.1
UN0429.1.10 / UN0429.1.12 / UN0429.1.13 / UN0429.1.15 / UN0429.1.18
UN0429.1.11 / UN0429.1.14 / UN0429.1.15 / UN0429.1.19
UN0429.1.13 / UN0429.1.17
UN0429.1.14 / UN0429.1.18
UN0429.1.16 / UN0429.1.20
UN0429.1.17
UN0429.1.19 / UN0429.1.20
UN0429.1.2 / UN0429.1.4 / UN0429.1.5 / UN0429.1.6 / UN0429.1.9
UN0429.1.11 / UN0429.1.3 / UN0429.1.4 / UN0429.1.5 / UN0429.1.7
UN0429.1.8
UN0429.1.12 / UN0429.1.9
UN0430.1.1
UN0430.1.10 / UN0430.1.13
UN0430.1.11 / UN0430.1.14 / UN0430.1.15 / UN0430.1.18 / UN0430.1.5 / UN0430.1.7 / UN0430.1.8
UN0430.1.12 / UN0430.1.16
UN0430.1.13 / UN0430.1.17 / UN0430.1.8 / UN0430.1.9
UN0430.1.15 / UN0430.1.19
UN0430.1.16 / UN0430.1.20
UN0430.1.17
UN0430.1.18
UN0430.1.19
UN0430.1.2
UN0430.1.20
UN0430.1.3 / UN0430.1.4 / UN0430.1.6
UN0430.1.11 / UN0430.1.9
UN0429.1.16 / UN0429.1.8
UN0428.1.10
UN0428.1.12
UN0428.1.13
UN0428.1.15
UN0428.1.17
UN0428.1.19
UN0428.1.5
UN0428.2.1 / UN0428.2.10 / UN0428.2.14 / UN0428.2.2 / UN0428.2.3 / UN0428.2.4 / UN0428.2.5 / UN0428.2.6 / UN0428.2.7 / UN0428.2.8 / UN0428.2.9
UN0428.2.11 / UN0428.2.13
UN0428.2.12 / UN0428.2.17 / UN0428.2.18 / UN0428.2.19
UN0428.2.15 / UN0428.2.16 / UN0428.2.20
UN0429.1.10 / UN0429.1.3 / UN0429.1.6
UN0429.2.1
UN0429.2.10 / UN0429.2.12 / UN0429.2.18
UN0429.2.11 / UN0429.2.15
UN0429.2.13 / UN0429.2.16 / UN0429.2.17 / UN0429.2.3 / UN0429.2.5 / UN0429.2.7 / UN0429.2.9
UN0429.2.14
UN0429.2.19 / UN0429.2.20
UN0429.2.2 / UN0429.2.4 / UN0429.2.6
UN0430.1.10 / UN0430.1.12
UN0430.1.14
UN0430.1.7
UN0430.2.1 / UN0430.2.2
UN0430.2.10
UN0430.2.11 / UN0430.2.14 / UN0430.2.5 / UN0430.2.7
UN0430.2.12 / UN0430.2.20
UN0430.2.13 / UN0430.2.8
UN0430.2.15
UN0430.2.16 / UN0430.2.18
UN0430.2.17
UN0430.2.3 / UN0430.2.4 / UN0430.2.6
			
Related annotations: PaperBLAST

	
			


			

				

				
				
				
				

			

			

		

	
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