Transcription Factor
| Accessions: | AL8G38770.t1 (EEADannot 2026-03-04) |
| Names: | ARF2 |
| Organisms: | Arabidopsis lyrata |
| Libraries: | EEADannot 2026-03-04 1 1 Contreras-Moreira B, Sebastian A. FootprintDB: Analysis of Plant Cis-Regulatory Elements, Transcription Factors, and Binding Interfaces. Methods Mol Biol 1482:259-77 (2016) [Pubmed] |
| Notes: | family:B3 ARF |
| Length: | 858 |
| Pfam Domains: | 160-261 B3 DNA binding domain 286-368 Auxin response factor 640-823 AUX/IAA family |
| Sequence: (in bold interface residues) | 1 MASSEVSMKGNRGGDNFSSSAFSDPKETRNGEGQKSNSSRPAAAERAVDPEAALYRELWH 60 61 ACAGPLVTVPRQDDRVFYFPQGHIEQVEASTNQAAEQQMPLYDLPSKLLCRVINVDLKAE 120 121 ADTDEVYAQITLLPEANQDENAIEKEAPPPPPPRFQVHSFCKTLTASDTSTHGGFSVLRR 180 181 HADECLPPLDMSRQPPTQELVAKDLHANEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVA 240 241 GDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAISTGTMFTVYY 300 301 KPRTSPSEFIVPFDQYMESVKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIEDSDITRWP 360 361 KSKWRSLKVRWDETSSIPRPDRVSPWKIEPALAPPALSPVPMPRPKRPRSNIAPSSPDSS 420 421 MLTREGTTKANMDPLPASGLSRVLQGQEYSTLRTKHTESVECDAPENSVVWQSSADDDKV 480 481 DVVSCSRRYGSENWMPSARHEPTYTDLLSGFGANIEPSHGQRIPFYDHSSSPSMPAKNIL 540 541 SDPEGKFDFLANQWQMMQSGLSLKLHESPKVPAATDASFQGRGNVKYSEYPVLNGLSTEN 600 601 AGGNWPIRPRALNYYEEVVHAQAQAQAQAQAREQATKQPVTIQEETAKSREGNCRLFGIP 660 661 LSNNMNGTDSAMSQRSNLNDAAGLTQLASPKVQDLPDQSKGSKSTNDHREQGRPFQTNNP 720 721 HPKDAHTKSNSSRSCTKVHKQGIALGRSVDLSKFQNYEELIAELDRLFEFNGELMAPKKD 780 781 WLIVYTDDENDMMLVGDDPWQEFCCMVRKIFIYTKEEVRKMNPGTLSCRSEEGVVGEGSD 840 841 AKDAKSASNPSLSSAGNS |
| Interface Residues: | 167, 172, 173, 174, 176, 217, 219, 220, 222 |
| 3D-footprint Homologues: | 6ycq_A, 7et6_A, 8oj2_A |
| Binding Motifs: | EEAD0598 TGTCGGmwwwtmrssrRC |
| Related annotations: | PaperBLAST |
Disclaimer and license
These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.